Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33020

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
3,460,625	+				+0.8
3,460,635	+				+1.0
3,460,733	+				+1.5
3,460,733	+				-0.9
3,460,741	-				-0.1
3,460,754	+				-1.3
3,460,789	+				-0.7
3,460,897	-		PGA1_c33010	0.15	-1.3
3,461,134	-		PGA1_c33010	0.48	-2.3
3,461,236	-		PGA1_c33010	0.62	-1.5
3,461,312	-		PGA1_c33010	0.73	-2.3
3,461,337	-		PGA1_c33010	0.77	-1.4
3,461,341	+		PGA1_c33010	0.77	+0.1
3,461,368	-		PGA1_c33010	0.81	-2.7
3,461,523	-				-1.0
3,461,608	+				-1.1
3,461,608	+				+0.6
3,461,610	-				+0.2
3,461,611	-				-1.1
3,461,616	-				-0.3
3,461,642	+				-0.2
3,461,744	+		PGA1_c33020	0.23	-0.1
3,461,808	-		PGA1_c33020	0.33	-1.7
3,461,829	+		PGA1_c33020	0.36	+0.2
3,461,841	+		PGA1_c33020	0.38	+1.0
3,461,868	+		PGA1_c33020	0.42	+0.7
3,461,876	-		PGA1_c33020	0.44	+0.2
3,461,876	-		PGA1_c33020	0.44	+2.5
3,461,893	+		PGA1_c33020	0.46	+0.4
3,461,893	+		PGA1_c33020	0.46	+0.7
3,461,923	+		PGA1_c33020	0.51	-2.6
3,461,931	-		PGA1_c33020	0.52	-0.5
3,462,062	-		PGA1_c33020	0.72	+0.1
3,462,073	+		PGA1_c33020	0.74	-0.7
3,462,081	-		PGA1_c33020	0.75	+0.3
3,462,106	+		PGA1_c33020	0.79	+0.6
3,462,106	+		PGA1_c33020	0.79	+0.2
3,462,106	+		PGA1_c33020	0.79	+0.7
3,462,106	+		PGA1_c33020	0.79	+0.8
3,462,106	+		PGA1_c33020	0.79	-0.2
3,462,114	-		PGA1_c33020	0.80	+0.6
3,462,118	+		PGA1_c33020	0.81	+0.6
3,462,153	+		PGA1_c33020	0.86	+1.4
3,462,238	+				-0.7
3,462,238	+				-0.6
3,462,247	-				+0.4
3,462,249	+				+0.2
3,462,249	+				-1.5
3,462,249	+				-0.2
3,462,252	-				-0.2
3,462,252	-				+0.5
3,462,252	-				+1.2
3,462,252	-				-1.9
3,462,257	-				-1.0
3,462,257	-				-2.1
3,462,257	-				+0.1
3,462,257	-				+0.1
3,462,257	-				+0.1
3,462,292	-				-2.1
3,462,298	+				-1.2
3,462,305	+				+0.9
3,462,305	+				+0.4
3,462,305	+				-0.5
3,462,305	+				+0.2
3,462,305	+				-1.5
3,462,305	+				+0.1
3,462,305	+				-0.7
3,462,305	+				+0.3
3,462,306	-				+0.9
3,462,313	-				+0.2
3,462,313	-				+0.3
3,462,313	-				-0.8
3,462,313	-				-1.3
3,462,314	-				+0.2
3,462,322	+				-0.2
3,462,356	+		PGA1_c33030	0.30	+1.2
3,462,356	+		PGA1_c33030	0.30	-0.2
3,462,357	+		PGA1_c33030	0.30	+0.6
3,462,357	+		PGA1_c33030	0.30	-0.3
3,462,364	-		PGA1_c33030	0.35	+0.4
3,462,364	-		PGA1_c33030	0.35	+0.9
3,462,364	-		PGA1_c33030	0.35	-0.5
3,462,364	-		PGA1_c33030	0.35	-1.4
3,462,364	-		PGA1_c33030	0.35	-0.8
3,462,374	-		PGA1_c33030	0.41	-0.1
3,462,409	+		PGA1_c33030	0.62	+1.2
3,462,410	+		PGA1_c33030	0.62	-0.8
3,462,410	+		PGA1_c33030	0.62	+0.7
3,462,418	-		PGA1_c33030	0.67	+0.5
3,462,418	-		PGA1_c33030	0.67	-0.1
3,462,418	-		PGA1_c33030	0.67	-0.8
3,462,418	-		PGA1_c33030	0.67	-0.6
3,462,418	-		PGA1_c33030	0.67	-0.2
3,462,428	-		PGA1_c33030	0.73	+0.2
3,462,428	-		PGA1_c33030	0.73	-0.0
3,462,475	+				+0.1
3,462,483	-				-0.1
3,462,483	-				-0.8
3,462,524	+				+1.6
3,462,524	+				+0.2
3,462,532	-				-1.3
3,462,534	+				+1.6
3,462,542	-				-0.5
3,462,618	-				-1.1
3,462,646	+				+0.0
3,462,721	-		PGA1_c33040	0.11	+0.7
3,462,789	+		PGA1_c33040	0.16	+1.3
3,462,797	-		PGA1_c33040	0.16	-0.4
3,462,810	+		PGA1_c33040	0.17	+0.6
3,462,821	+		PGA1_c33040	0.18	+0.1
3,462,829	-		PGA1_c33040	0.18	-0.0
3,462,829	-		PGA1_c33040	0.18	+0.1
3,462,894	-		PGA1_c33040	0.23	-0.3
3,462,894	-		PGA1_c33040	0.23	-0.1
3,462,901	+		PGA1_c33040	0.23	+1.3
3,462,947	-		PGA1_c33040	0.27	+0.7
3,462,963	-		PGA1_c33040	0.28	+0.1
3,462,989	-		PGA1_c33040	0.30	+0.4
3,463,009	-		PGA1_c33040	0.31	+0.4
3,463,036	+		PGA1_c33040	0.33	+1.2
3,463,044	-		PGA1_c33040	0.33	-0.1
3,463,093	+		PGA1_c33040	0.37	-0.1