Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28360

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
2,966,254	-				+0.5
2,966,366	+				+0.6
2,966,382	-				-0.1
2,966,382	-				+0.8
2,966,437	+		PGA1_c28350	0.13	-0.6
2,966,437	+		PGA1_c28350	0.13	+0.4
2,966,445	-		PGA1_c28350	0.14	-0.7
2,966,445	-		PGA1_c28350	0.14	-0.5
2,966,445	-		PGA1_c28350	0.14	+0.3
2,966,445	-		PGA1_c28350	0.14	-0.1
2,966,445	-		PGA1_c28350	0.14	+1.4
2,966,512	+		PGA1_c28350	0.24	+0.2
2,966,549	+		PGA1_c28350	0.29	+0.8
2,966,557	-		PGA1_c28350	0.30	-0.4
2,966,603	+		PGA1_c28350	0.37	-0.5
2,966,623	+		PGA1_c28350	0.40	+0.2
2,966,629	-		PGA1_c28350	0.40	+0.4
2,966,690	+		PGA1_c28350	0.49	-0.0
2,966,699	-		PGA1_c28350	0.51	+0.0
2,966,700	-		PGA1_c28350	0.51	-0.3
2,966,767	+		PGA1_c28350	0.60	-0.7
2,966,774	-		PGA1_c28350	0.61	-0.4
2,966,804	+		PGA1_c28350	0.66	-0.8
2,966,854	+		PGA1_c28350	0.73	-0.5
2,966,854	+		PGA1_c28350	0.73	+0.4
2,966,885	-		PGA1_c28350	0.77	-0.5
2,966,902	-		PGA1_c28350	0.80	-1.2
2,967,050	+				+1.0
2,967,068	+				+0.4
2,967,112	-				-0.2
2,967,192	+		PGA1_c28360	0.15	-0.7
2,967,268	-		PGA1_c28360	0.22	-1.1
2,967,291	+		PGA1_c28360	0.24	+0.7
2,967,309	-		PGA1_c28360	0.26	+0.6
2,967,309	-		PGA1_c28360	0.26	-1.0
2,967,349	+		PGA1_c28360	0.30	-2.1
2,967,435	+		PGA1_c28360	0.38	+0.5
2,967,463	+		PGA1_c28360	0.41	-1.0
2,967,499	-		PGA1_c28360	0.44	-0.8
2,967,554	+		PGA1_c28360	0.50	+0.4
2,967,587	+		PGA1_c28360	0.53	-0.0
2,967,592	+		PGA1_c28360	0.53	-0.5
2,967,595	-		PGA1_c28360	0.54	-0.1
2,967,606	-		PGA1_c28360	0.55	-2.0
2,967,621	-		PGA1_c28360	0.56	-1.9
2,967,738	+		PGA1_c28360	0.67	+0.8
2,967,750	+		PGA1_c28360	0.69	-1.3
2,967,754	+		PGA1_c28360	0.69	-1.7
2,967,763	-		PGA1_c28360	0.70	+0.6
2,967,822	+		PGA1_c28360	0.75	-0.9
2,967,856	+		PGA1_c28360	0.79	-0.1
2,967,865	+		PGA1_c28360	0.80	-2.2
2,967,891	-		PGA1_c28360	0.82	-1.1
2,967,914	+		PGA1_c28360	0.84	-0.9
2,967,920	-		PGA1_c28360	0.85	-0.5
2,967,922	-		PGA1_c28360	0.85	+0.1
2,967,922	-		PGA1_c28360	0.85	+0.0
2,967,981	-				+0.1
2,967,987	+				-0.4
2,968,053	+				+1.4
2,968,053	+				+0.4
2,968,053	+				-0.6
2,968,053	+				-2.1
2,968,053	+				+1.9
2,968,084	+				-0.1
2,968,084	+				+0.3
2,968,084	+				-0.1
2,968,096	+				+0.6
2,968,102	-				+0.3
2,968,107	+				-0.7
2,968,120	+				-1.1
2,968,139	+				+0.2
2,968,139	+				-0.0
2,968,147	-				-0.7
2,968,164	-				-0.0
2,968,178	-				-1.5
2,968,178	-				-0.7
2,968,178	-				-0.6
2,968,178	-				-0.1
2,968,178	-				-0.3
2,968,183	+				+0.6
2,968,183	+				-0.7
2,968,191	-				+0.2
2,968,193	+				-0.6
2,968,201	+				-0.3
2,968,209	-				-0.2
2,968,218	+				+0.6
2,968,223	-				-0.4
2,968,228	+				-0.1
2,968,228	+				+1.0
2,968,228	+				-0.7
2,968,228	+				-0.2
2,968,236	-				+1.1
2,968,236	-				-0.7
2,968,236	-				-0.4
2,968,236	-				-0.6
2,968,390	-		PGA1_c28370	0.26	-0.9
2,968,390	-		PGA1_c28370	0.26	-1.3
2,968,390	-		PGA1_c28370	0.26	-0.8
2,968,410	-		PGA1_c28370	0.29	+0.3
2,968,511	+		PGA1_c28370	0.45	+1.2
2,968,514	-		PGA1_c28370	0.45	-0.0
2,968,538	+		PGA1_c28370	0.49	-0.3
2,968,546	-		PGA1_c28370	0.50	+0.4
2,968,591	+		PGA1_c28370	0.57	-0.6
2,968,597	+		PGA1_c28370	0.58	-0.7
2,968,614	+		PGA1_c28370	0.61	-0.0
2,968,644	+		PGA1_c28370	0.66	-0.7
2,968,691	-		PGA1_c28370	0.73	+0.3
2,968,691	-		PGA1_c28370	0.73	-0.4
2,968,691	-		PGA1_c28370	0.73	-1.3
2,968,744	-		PGA1_c28370	0.81	-0.5
2,968,744	-		PGA1_c28370	0.81	-0.2
2,968,800	+				+0.5
2,968,800	+				-1.0
2,968,800	+				-1.2
2,968,808	+				+0.8
2,968,808	+				-0.1
2,968,808	+				+0.3
2,968,808	+				+1.0
2,968,816	-				-0.0
2,968,816	-				+0.4
2,968,883	-				+0.9
2,968,888	+				+1.1
2,968,888	+				+1.1
2,968,896	-				-0.2
2,968,896	-				-2.4
2,968,896	-				+0.8
2,968,896	-				-0.4
2,968,906	-				+0.1
2,968,906	-				-0.1
2,968,926	-				-1.2
2,968,936	-				+0.3
2,968,965	+				+0.3
2,968,965	+				-0.6
2,968,965	+				+0.1
2,968,965	+				+0.3
2,968,965	+				-1.9
2,968,965	+				-0.7
2,968,965	+				-0.5
2,968,973	-				-2.0
2,968,973	-				-0.2
2,968,973	-				+0.2
2,969,050	+				-0.5
2,969,050	+				-1.0
2,969,067	-				+0.5