Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2701 and HP15_2702 are separated by 75 nucleotides HP15_2702 and HP15_2703 are separated by 120 nucleotides
HP15_2701: HP15_2701 - phenylacetic acid degradation oxidoreductase PaaK, at 2,852,657 to 2,853,736
_2701
HP15_2702: HP15_2702 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase, at 2,853,812 to 2,855,869
_2702
HP15_2703: HP15_2703 - branched-chain amino acid ABC transporter ATP-binding protein, at 2,855,990 to 2,857,354
_2703
Position (kb)
2853
2854
2855
2856 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2852.850 kb on + strand, within HP15_2701 at 2853.032 kb on - strand, within HP15_2701 at 2853.176 kb on - strand, within HP15_2701 at 2853.760 kb on + strand at 2854.013 kb on + strand at 2854.042 kb on - strand, within HP15_2702 at 2854.242 kb on + strand, within HP15_2702 at 2854.370 kb on + strand, within HP15_2702 at 2854.596 kb on - strand, within HP15_2702 at 2854.597 kb on + strand, within HP15_2702 at 2854.741 kb on + strand, within HP15_2702 at 2854.749 kb on - strand, within HP15_2702 at 2854.782 kb on + strand, within HP15_2702 at 2854.834 kb on - strand, within HP15_2702 at 2855.072 kb on + strand, within HP15_2702 at 2855.097 kb on + strand, within HP15_2702 at 2855.106 kb on + strand, within HP15_2702 at 2855.129 kb on - strand, within HP15_2702 at 2855.572 kb on + strand, within HP15_2702 at 2855.736 kb on - strand at 2855.782 kb on + strand at 2855.785 kb on - strand at 2855.916 kb on - strand at 2855.941 kb on + strand at 2855.949 kb on - strand at 2856.093 kb on + strand at 2856.146 kb on - strand, within HP15_2703 at 2856.293 kb on - strand, within HP15_2703 at 2856.393 kb on - strand, within HP15_2703 at 2856.393 kb on - strand, within HP15_2703 at 2856.393 kb on - strand, within HP15_2703 at 2856.393 kb on - strand, within HP15_2703 at 2856.469 kb on + strand, within HP15_2703 at 2856.558 kb on + strand, within HP15_2703 at 2856.558 kb on + strand, within HP15_2703 at 2856.626 kb on - strand, within HP15_2703 at 2856.626 kb on - strand, within HP15_2703 at 2856.666 kb on + strand, within HP15_2703 at 2856.719 kb on + strand, within HP15_2703
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,852,850 + HP15_2701 0.18 +0.7 2,853,032 - HP15_2701 0.35 +0.7 2,853,176 - HP15_2701 0.48 -0.9 2,853,760 + -0.5 2,854,013 + +2.0 2,854,042 - HP15_2702 0.11 +1.3 2,854,242 + HP15_2702 0.21 +1.0 2,854,370 + HP15_2702 0.27 -0.3 2,854,596 - HP15_2702 0.38 +0.4 2,854,597 + HP15_2702 0.38 +0.2 2,854,741 + HP15_2702 0.45 +0.8 2,854,749 - HP15_2702 0.46 +0.5 2,854,782 + HP15_2702 0.47 +1.3 2,854,834 - HP15_2702 0.50 +1.2 2,855,072 + HP15_2702 0.61 +1.2 2,855,097 + HP15_2702 0.62 +0.9 2,855,106 + HP15_2702 0.63 +0.9 2,855,129 - HP15_2702 0.64 +0.9 2,855,572 + HP15_2702 0.86 +0.8 2,855,736 - +1.0 2,855,782 + +0.6 2,855,785 - +0.6 2,855,916 - +0.5 2,855,941 + +0.3 2,855,949 - -1.0 2,856,093 + +1.5 2,856,146 - HP15_2703 0.11 -4.1 2,856,293 - HP15_2703 0.22 -0.4 2,856,393 - HP15_2703 0.30 +0.2 2,856,393 - HP15_2703 0.30 -0.2 2,856,393 - HP15_2703 0.30 +0.1 2,856,393 - HP15_2703 0.30 -0.0 2,856,469 + HP15_2703 0.35 -0.6 2,856,558 + HP15_2703 0.42 -0.0 2,856,558 + HP15_2703 0.42 -0.2 2,856,626 - HP15_2703 0.47 -0.1 2,856,626 - HP15_2703 0.47 -0.7 2,856,666 + HP15_2703 0.50 -0.5 2,856,719 + HP15_2703 0.53 +0.8
Or see this region's nucleotide sequence