Strain Fitness in Marinobacter adhaerens HP15 around HP15_2702

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2701 and HP15_2702 are separated by 75 nucleotidesHP15_2702 and HP15_2703 are separated by 120 nucleotides HP15_2701: HP15_2701 - phenylacetic acid degradation oxidoreductase PaaK, at 2,852,657 to 2,853,736 _2701 HP15_2702: HP15_2702 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase, at 2,853,812 to 2,855,869 _2702 HP15_2703: HP15_2703 - branched-chain amino acid ABC transporter ATP-binding protein, at 2,855,990 to 2,857,354 _2703 Position (kb) 2853 2854 2855 2856Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2852.850 kb on + strand, within HP15_2701at 2853.032 kb on - strand, within HP15_2701at 2853.176 kb on - strand, within HP15_2701at 2853.760 kb on + strandat 2854.013 kb on + strandat 2854.042 kb on - strand, within HP15_2702at 2854.242 kb on + strand, within HP15_2702at 2854.370 kb on + strand, within HP15_2702at 2854.596 kb on - strand, within HP15_2702at 2854.597 kb on + strand, within HP15_2702at 2854.741 kb on + strand, within HP15_2702at 2854.749 kb on - strand, within HP15_2702at 2854.782 kb on + strand, within HP15_2702at 2854.834 kb on - strand, within HP15_2702at 2855.072 kb on + strand, within HP15_2702at 2855.097 kb on + strand, within HP15_2702at 2855.106 kb on + strand, within HP15_2702at 2855.129 kb on - strand, within HP15_2702at 2855.572 kb on + strand, within HP15_2702at 2855.736 kb on - strandat 2855.782 kb on + strandat 2855.785 kb on - strandat 2855.916 kb on - strandat 2855.941 kb on + strandat 2855.949 kb on - strandat 2856.093 kb on + strandat 2856.146 kb on - strand, within HP15_2703at 2856.293 kb on - strand, within HP15_2703at 2856.393 kb on - strand, within HP15_2703at 2856.393 kb on - strand, within HP15_2703at 2856.393 kb on - strand, within HP15_2703at 2856.393 kb on - strand, within HP15_2703at 2856.469 kb on + strand, within HP15_2703at 2856.558 kb on + strand, within HP15_2703at 2856.558 kb on + strand, within HP15_2703at 2856.626 kb on - strand, within HP15_2703at 2856.626 kb on - strand, within HP15_2703at 2856.666 kb on + strand, within HP15_2703at 2856.719 kb on + strand, within HP15_2703

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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2,852,850 + HP15_2701 0.18 +0.7
2,853,032 - HP15_2701 0.35 +0.7
2,853,176 - HP15_2701 0.48 -0.9
2,853,760 + -0.5
2,854,013 + +2.0
2,854,042 - HP15_2702 0.11 +1.3
2,854,242 + HP15_2702 0.21 +1.0
2,854,370 + HP15_2702 0.27 -0.3
2,854,596 - HP15_2702 0.38 +0.4
2,854,597 + HP15_2702 0.38 +0.2
2,854,741 + HP15_2702 0.45 +0.8
2,854,749 - HP15_2702 0.46 +0.5
2,854,782 + HP15_2702 0.47 +1.3
2,854,834 - HP15_2702 0.50 +1.2
2,855,072 + HP15_2702 0.61 +1.2
2,855,097 + HP15_2702 0.62 +0.9
2,855,106 + HP15_2702 0.63 +0.9
2,855,129 - HP15_2702 0.64 +0.9
2,855,572 + HP15_2702 0.86 +0.8
2,855,736 - +1.0
2,855,782 + +0.6
2,855,785 - +0.6
2,855,916 - +0.5
2,855,941 + +0.3
2,855,949 - -1.0
2,856,093 + +1.5
2,856,146 - HP15_2703 0.11 -4.1
2,856,293 - HP15_2703 0.22 -0.4
2,856,393 - HP15_2703 0.30 +0.2
2,856,393 - HP15_2703 0.30 -0.2
2,856,393 - HP15_2703 0.30 +0.1
2,856,393 - HP15_2703 0.30 -0.0
2,856,469 + HP15_2703 0.35 -0.6
2,856,558 + HP15_2703 0.42 -0.0
2,856,558 + HP15_2703 0.42 -0.2
2,856,626 - HP15_2703 0.47 -0.1
2,856,626 - HP15_2703 0.47 -0.7
2,856,666 + HP15_2703 0.50 -0.5
2,856,719 + HP15_2703 0.53 +0.8

Or see this region's nucleotide sequence