Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27370

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
2,850,792	+		PGA1_c27350	0.64	+0.4
2,850,809	+		PGA1_c27350	0.66	-0.2
2,850,809	+		PGA1_c27350	0.66	-0.9
2,850,809	+		PGA1_c27350	0.66	+0.5
2,850,817	-		PGA1_c27350	0.67	+1.8
2,850,862	+		PGA1_c27350	0.72	+0.7
2,851,019	+				-0.1
2,851,084	+				-1.3
2,851,190	-				+0.2
2,851,226	+				+1.1
2,851,226	+				+0.9
2,851,255	+				+0.8
2,851,255	+				-0.2
2,851,255	+				+0.0
2,851,258	-				+0.1
2,851,263	-				+1.0
2,851,263	-				-0.1
2,851,263	-				-1.5
2,851,269	+				+0.2
2,851,418	+		PGA1_c27360	0.34	+0.1
2,851,482	+		PGA1_c27360	0.46	-0.2
2,851,482	+		PGA1_c27360	0.46	+1.1
2,851,482	+		PGA1_c27360	0.46	-0.3
2,851,495	-		PGA1_c27360	0.48	-0.1
2,851,495	-		PGA1_c27360	0.48	-1.1
2,851,502	+		PGA1_c27360	0.49	+0.2
2,851,571	+		PGA1_c27360	0.62	-0.4
2,851,691	+		PGA1_c27360	0.85	+1.6
2,851,699	-		PGA1_c27360	0.86	+0.6
2,851,701	+		PGA1_c27360	0.86	+0.9
2,851,701	+		PGA1_c27360	0.86	-0.8
2,851,701	+		PGA1_c27360	0.86	+0.8
2,851,709	-		PGA1_c27360	0.88	-0.3
2,851,709	-		PGA1_c27360	0.88	-0.2
2,851,723	+				+0.5
2,851,723	-				-1.8
2,851,846	+				-0.5
2,851,854	-				+1.4
2,851,854	-				-0.8
2,851,858	+				-0.0
2,851,899	+				-0.9
2,851,899	+				-0.6
2,851,950	-		PGA1_c27370	0.13	+0.4
2,852,024	+		PGA1_c27370	0.18	+0.1
2,852,032	-		PGA1_c27370	0.19	+0.1
2,852,032	-		PGA1_c27370	0.19	-0.4
2,852,137	+		PGA1_c27370	0.27	-0.6
2,852,162	-		PGA1_c27370	0.29	+0.5
2,852,173	+		PGA1_c27370	0.30	+0.6
2,852,204	+		PGA1_c27370	0.32	-0.7
2,852,205	-		PGA1_c27370	0.32	-1.6
2,852,220	-		PGA1_c27370	0.33	+0.8
2,852,224	-		PGA1_c27370	0.33	-1.0
2,852,242	-		PGA1_c27370	0.35	-0.8
2,852,251	-		PGA1_c27370	0.36	+0.7
2,852,255	+		PGA1_c27370	0.36	-0.0
2,852,298	+		PGA1_c27370	0.39	+0.6
2,852,330	-		PGA1_c27370	0.41	-0.3
2,852,440	+		PGA1_c27370	0.50	+0.8
2,852,440	+		PGA1_c27370	0.50	+0.9
2,852,541	+		PGA1_c27370	0.57	-0.5
2,852,546	+		PGA1_c27370	0.58	-0.9
2,852,575	+		PGA1_c27370	0.60	-0.6
2,852,581	+		PGA1_c27370	0.60	-0.2
2,852,623	-		PGA1_c27370	0.64	+0.2
2,852,656	+		PGA1_c27370	0.66	-0.6
2,852,663	+		PGA1_c27370	0.67	+0.3
2,852,668	+		PGA1_c27370	0.67	-0.2
2,852,745	-		PGA1_c27370	0.73	+0.6
2,852,752	-		PGA1_c27370	0.73	+1.0
2,852,752	-		PGA1_c27370	0.73	-2.1
2,852,752	-		PGA1_c27370	0.73	-1.0
2,852,801	+		PGA1_c27370	0.77	+0.8
2,852,801	+		PGA1_c27370	0.77	-2.5
2,852,809	-		PGA1_c27370	0.78	+1.0
2,852,841	-		PGA1_c27370	0.80	-0.4
2,852,939	+		PGA1_c27370	0.87	+0.8
2,852,997	+				-2.2
2,853,005	-				+0.1
2,853,059	-				-1.3
2,853,075	-				+0.3
2,853,165	+				-1.9
2,853,184	-				+0.5
2,853,262	+				-0.3
2,853,262	+				-0.8
2,853,262	+				+0.5
2,853,270	-				-0.4
2,853,368	-		PGA1_c27380	0.11	+0.0
2,853,370	-		PGA1_c27380	0.11	-0.6
2,853,370	-		PGA1_c27380	0.11	-0.2
2,853,370	-		PGA1_c27380	0.11	-0.5
2,853,441	+		PGA1_c27380	0.18	-1.0
2,853,588	+		PGA1_c27380	0.33	-0.2
2,853,596	-		PGA1_c27380	0.34	+0.3
2,853,596	-		PGA1_c27380	0.34	-0.3
2,853,596	-		PGA1_c27380	0.34	-0.3
2,853,614	+		PGA1_c27380	0.36	-0.6
2,853,614	+		PGA1_c27380	0.36	+0.3
2,853,678	+		PGA1_c27380	0.43	-0.1
2,853,728	-		PGA1_c27380	0.48	+0.6
2,853,772	+		PGA1_c27380	0.53	-0.5
2,853,775	-		PGA1_c27380	0.53	-0.9
2,853,777	+		PGA1_c27380	0.53	-1.5
2,853,777	+		PGA1_c27380	0.53	+0.3
2,853,780	-		PGA1_c27380	0.53	-0.6
2,853,793	+		PGA1_c27380	0.55	-2.9
2,853,825	+		PGA1_c27380	0.58	-0.3
2,853,840	+		PGA1_c27380	0.60	-0.4
2,853,849	-		PGA1_c27380	0.61	-0.6
2,853,860	+		PGA1_c27380	0.62	+0.0
2,853,860	+		PGA1_c27380	0.62	-1.8
2,853,860	+		PGA1_c27380	0.62	-0.6
2,853,860	+		PGA1_c27380	0.62	-0.2
2,853,860	+		PGA1_c27380	0.62	+0.4
2,853,860	+		PGA1_c27380	0.62	-0.4
2,853,860	+		PGA1_c27380	0.62	-0.3
2,853,881	+		PGA1_c27380	0.64	-0.6
2,853,925	+		PGA1_c27380	0.68	-0.7
2,853,933	-		PGA1_c27380	0.69	-1.1
2,853,933	-		PGA1_c27380	0.69	-0.7
2,854,020	+		PGA1_c27380	0.78	+0.7
2,854,047	+		PGA1_c27380	0.81	+0.9
2,854,052	+		PGA1_c27380	0.82	-0.2
2,854,062	+		PGA1_c27380	0.83	+1.0
2,854,062	+		PGA1_c27380	0.83	+0.0
2,854,062	+		PGA1_c27380	0.83	-0.7
2,854,062	+		PGA1_c27380	0.83	+0.9
2,854,070	-		PGA1_c27380	0.83	+0.4
2,854,088	+		PGA1_c27380	0.85	+0.4