Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2510 and HP15_2511 are separated by 174 nucleotides HP15_2511 and HP15_2512 are separated by 15 nucleotides HP15_2512 and HP15_2513 are separated by 7 nucleotides
HP15_2510: HP15_2510 - flagellar motor protein MotA, at 2,650,086 to 2,650,937
_2510
HP15_2511: HP15_2511 - phosphatidylserine decarboxylase proenzyme, at 2,651,112 to 2,651,966
_2511
HP15_2512: HP15_2512 - tRNA synthetase, class II (D, K and N), at 2,651,982 to 2,652,950
_2512
HP15_2513: HP15_2513 - translation elongation factor P, at 2,652,958 to 2,653,488
_2513
Position (kb)
2651
2652 Strain fitness (log2 ratio)
-1
0
1
2 at 2650.221 kb on + strand, within HP15_2510 at 2650.284 kb on + strand, within HP15_2510 at 2650.325 kb on - strand, within HP15_2510 at 2650.468 kb on - strand, within HP15_2510 at 2650.556 kb on - strand, within HP15_2510 at 2650.602 kb on - strand, within HP15_2510 at 2650.687 kb on + strand, within HP15_2510 at 2650.809 kb on + strand, within HP15_2510 at 2650.809 kb on + strand, within HP15_2510 at 2650.817 kb on - strand, within HP15_2510 at 2650.880 kb on + strand at 2650.905 kb on - strand at 2650.937 kb on - strand at 2651.031 kb on - strand at 2652.003 kb on + strand at 2652.211 kb on + strand, within HP15_2512 at 2652.225 kb on - strand, within HP15_2512 at 2652.345 kb on - strand, within HP15_2512 at 2652.345 kb on - strand, within HP15_2512 at 2652.437 kb on + strand, within HP15_2512 at 2652.569 kb on + strand, within HP15_2512 at 2652.609 kb on - strand, within HP15_2512 at 2652.676 kb on - strand, within HP15_2512 at 2652.735 kb on + strand, within HP15_2512 at 2652.824 kb on + strand, within HP15_2512 at 2652.953 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,650,221 + HP15_2510 0.16 +0.2 2,650,284 + HP15_2510 0.23 +0.3 2,650,325 - HP15_2510 0.28 -0.6 2,650,468 - HP15_2510 0.45 -0.9 2,650,556 - HP15_2510 0.55 +0.4 2,650,602 - HP15_2510 0.61 +0.0 2,650,687 + HP15_2510 0.71 +0.7 2,650,809 + HP15_2510 0.85 +0.0 2,650,809 + HP15_2510 0.85 +0.4 2,650,817 - HP15_2510 0.86 -0.1 2,650,880 + +0.6 2,650,905 - +0.1 2,650,937 - +1.2 2,651,031 - +0.1 2,652,003 + +0.8 2,652,211 + HP15_2512 0.24 +0.6 2,652,225 - HP15_2512 0.25 +1.0 2,652,345 - HP15_2512 0.37 +1.1 2,652,345 - HP15_2512 0.37 +1.3 2,652,437 + HP15_2512 0.47 +0.2 2,652,569 + HP15_2512 0.61 +0.5 2,652,609 - HP15_2512 0.65 +1.6 2,652,676 - HP15_2512 0.72 +1.5 2,652,735 + HP15_2512 0.78 +2.0 2,652,824 + HP15_2512 0.87 +1.4 2,652,953 - +0.3
Or see this region's nucleotide sequence