Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26010

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
2,708,854	-				+0.3
2,708,924	+		PGA1_c26000	0.11	+0.0
2,708,974	+		PGA1_c26000	0.16	+0.6
2,709,025	+		PGA1_c26000	0.22	-1.4
2,709,034	+		PGA1_c26000	0.23	+1.0
2,709,037	-		PGA1_c26000	0.23	+1.3
2,709,038	-		PGA1_c26000	0.23	-0.9
2,709,038	-		PGA1_c26000	0.23	-0.7
2,709,039	+		PGA1_c26000	0.24	+0.8
2,709,092	-		PGA1_c26000	0.29	+0.5
2,709,181	-		PGA1_c26000	0.39	+0.2
2,709,278	+		PGA1_c26000	0.50	+1.1
2,709,278	+		PGA1_c26000	0.50	-0.0
2,709,278	+		PGA1_c26000	0.50	+0.5
2,709,286	-		PGA1_c26000	0.51	+0.4
2,709,286	-		PGA1_c26000	0.51	+0.4
2,709,286	-		PGA1_c26000	0.51	-0.3
2,709,291	-		PGA1_c26000	0.51	+0.4
2,709,319	-		PGA1_c26000	0.54	-0.6
2,709,368	+		PGA1_c26000	0.60	-1.1
2,709,376	-		PGA1_c26000	0.61	+0.5
2,709,435	+		PGA1_c26000	0.67	+0.2
2,709,435	+		PGA1_c26000	0.67	+0.6
2,709,435	+		PGA1_c26000	0.67	+0.4
2,709,435	+		PGA1_c26000	0.67	+0.0
2,709,443	-		PGA1_c26000	0.68	-1.4
2,709,443	-		PGA1_c26000	0.68	+0.1
2,709,443	-		PGA1_c26000	0.68	-0.4
2,709,443	-		PGA1_c26000	0.68	-0.5
2,709,443	-		PGA1_c26000	0.68	-1.1
2,709,472	-		PGA1_c26000	0.71	+0.5
2,709,479	+		PGA1_c26000	0.72	-0.6
2,709,487	-		PGA1_c26000	0.73	-0.7
2,709,487	-		PGA1_c26000	0.73	+0.3
2,709,543	-		PGA1_c26000	0.79	+1.6
2,709,555	-		PGA1_c26000	0.80	-0.3
2,709,588	-		PGA1_c26000	0.84	+0.6
2,709,594	-		PGA1_c26000	0.84	+0.2
2,709,657	-				-2.2
2,709,697	+				-0.1
2,709,697	-				+1.0
2,709,776	-				-0.4
2,709,830	+				-2.2
2,709,835	+				+1.5
2,709,843	-				+0.1
2,709,855	+				-1.0
2,709,910	-		PGA1_c26010	0.18	-1.1
2,709,936	+		PGA1_c26010	0.24	-0.6
2,709,971	+		PGA1_c26010	0.32	-0.8
2,710,007	+		PGA1_c26010	0.40	-0.7
2,710,050	+		PGA1_c26010	0.49	-1.7
2,710,127	-		PGA1_c26010	0.67	-1.3
2,710,206	-		PGA1_c26010	0.85	-0.4
2,710,214	-		PGA1_c26010	0.87	-0.1
2,710,282	+				-0.1
2,710,330	+				+1.6
2,710,358	-		PGA1_c26020	0.10	+1.2
2,710,399	+		PGA1_c26020	0.24	+0.5
2,710,409	+		PGA1_c26020	0.27	-0.1
2,710,431	+		PGA1_c26020	0.34	-0.1
2,710,473	+		PGA1_c26020	0.48	-0.4
2,710,473	+		PGA1_c26020	0.48	+0.2
2,710,473	+		PGA1_c26020	0.48	-0.1
2,710,473	+		PGA1_c26020	0.48	+0.8
2,710,473	+		PGA1_c26020	0.48	-0.2
2,710,473	+		PGA1_c26020	0.48	-0.1
2,710,473	+		PGA1_c26020	0.48	-1.6
2,710,473	+		PGA1_c26020	0.48	-0.1
2,710,481	-				-0.0
2,710,481	-		PGA1_c26020	0.51	+0.6
2,710,481	-		PGA1_c26020	0.51	+0.4
2,710,481	-		PGA1_c26020	0.51	-0.4
2,710,481	-		PGA1_c26020	0.51	+0.3
2,710,481	-		PGA1_c26020	0.51	+0.1
2,710,481	-		PGA1_c26020	0.51	+0.9
2,710,481	-		PGA1_c26020	0.51	+0.4
2,710,481	-		PGA1_c26020	0.51	-0.4
2,710,481	-		PGA1_c26020	0.51	+0.5
2,710,481	-		PGA1_c26020	0.51	+0.4
2,710,481	-		PGA1_c26020	0.51	-2.0
2,710,506	+		PGA1_c26020	0.59	+1.0
2,710,521	+		PGA1_c26020	0.64	+0.2
2,710,531	+		PGA1_c26020	0.67	-0.6
2,710,610	+				+1.1
2,710,613	-				+0.3
2,710,618	-				-0.8
2,710,638	+				+1.6
2,710,638	+				+0.6
2,710,638	+				+0.3
2,710,638	+				+0.9
2,710,643	+				+1.6
2,710,646	-				+0.2
2,710,646	-				+0.2
2,710,646	-				+0.0
2,710,646	-				+0.1
2,710,689	-				+0.0
2,710,691	-				+0.1
2,710,691	-				+0.3
2,710,718	+		PGA1_c26030	0.21	-0.1
2,710,740	+		PGA1_c26030	0.37	+0.4
2,710,771	-		PGA1_c26030	0.60	+1.2
2,710,783	+		PGA1_c26030	0.69	-2.6
2,710,789	-		PGA1_c26030	0.73	+0.9
2,710,877	+				-1.1
2,710,890	+				-0.5
2,710,993	+				+0.9
2,710,993	+				-0.6
2,710,996	-				+0.1
2,711,041	-		PGA1_c26040	0.15	+1.3
2,711,058	+		PGA1_c26040	0.19	-1.0
2,711,080	-		PGA1_c26040	0.23	-1.0
2,711,129	+		PGA1_c26040	0.33	+0.8
2,711,176	+		PGA1_c26040	0.43	-1.6
2,711,177	-		PGA1_c26040	0.43	-1.1
2,711,177	-		PGA1_c26040	0.43	+0.2
2,711,220	+		PGA1_c26040	0.51	-0.4
2,711,255	-		PGA1_c26040	0.58	+1.1