Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2385 and HP15_2386 are separated by 28 nucleotides HP15_2386 and HP15_2387 are separated by 8 nucleotides HP15_2387 and HP15_2388 are separated by 1 nucleotides HP15_2388 and HP15_2389 are separated by 482 nucleotides
HP15_2385: HP15_2385 - UDP-glucose 6-dehydrogenase, at 2,515,051 to 2,516,223
_2385
HP15_2386: HP15_2386 - UDP-glucose 4-epimerase, at 2,516,252 to 2,517,208
_2386
HP15_2387: HP15_2387 - dTDP-glucose 4-6-dehydratase, at 2,517,217 to 2,518,164
_2387
HP15_2388: HP15_2388 - glycosyl transferase-like protein, at 2,518,166 to 2,518,474
_2388
HP15_2389: HP15_2389 - capsule polysaccharide biosynthetic protein, at 2,518,957 to 2,520,489
_2389
Position (kb)
2517
2518
2519 Strain fitness (log2 ratio)
-2
-1
0
1 at 2516.402 kb on + strand, within HP15_2386 at 2516.402 kb on + strand, within HP15_2386 at 2516.402 kb on + strand, within HP15_2386 at 2516.410 kb on - strand, within HP15_2386 at 2516.460 kb on + strand, within HP15_2386 at 2516.461 kb on + strand, within HP15_2386 at 2516.493 kb on + strand, within HP15_2386 at 2516.510 kb on - strand, within HP15_2386 at 2516.605 kb on + strand, within HP15_2386 at 2516.613 kb on - strand, within HP15_2386 at 2516.619 kb on + strand, within HP15_2386 at 2516.736 kb on - strand, within HP15_2386 at 2516.761 kb on + strand, within HP15_2386 at 2516.793 kb on - strand, within HP15_2386 at 2516.839 kb on - strand, within HP15_2386 at 2516.891 kb on + strand, within HP15_2386 at 2517.067 kb on + strand, within HP15_2386 at 2517.081 kb on + strand, within HP15_2386 at 2517.082 kb on - strand, within HP15_2386 at 2517.157 kb on + strand at 2518.968 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,516,402 + HP15_2386 0.16 -0.4 2,516,402 + HP15_2386 0.16 +0.5 2,516,402 + HP15_2386 0.16 +1.2 2,516,410 - HP15_2386 0.17 -0.8 2,516,460 + HP15_2386 0.22 -0.2 2,516,461 + HP15_2386 0.22 -0.3 2,516,493 + HP15_2386 0.25 -0.7 2,516,510 - HP15_2386 0.27 -0.9 2,516,605 + HP15_2386 0.37 -0.0 2,516,613 - HP15_2386 0.38 +0.4 2,516,619 + HP15_2386 0.38 -0.8 2,516,736 - HP15_2386 0.51 -0.6 2,516,761 + HP15_2386 0.53 -0.3 2,516,793 - HP15_2386 0.57 -0.6 2,516,839 - HP15_2386 0.61 +0.3 2,516,891 + HP15_2386 0.67 -0.3 2,517,067 + HP15_2386 0.85 -0.3 2,517,081 + HP15_2386 0.87 -0.8 2,517,082 - HP15_2386 0.87 +0.1 2,517,157 + -0.5 2,518,968 - -1.9
Or see this region's nucleotide sequence