Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_235 and HP15_236 are separated by 217 nucleotides HP15_236 and HP15_237 are separated by 74 nucleotides
HP15_235: HP15_235 - UbiD family decarboxylase, at 219,739 to 221,226
_235
HP15_236: HP15_236 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 221,444 to 222,232
_236
HP15_237: HP15_237 - HemY domain protein, at 222,307 to 223,548
_237
Position (kb) 221
222
223 Strain fitness (log2 ratio) -2
-1
0
1
2 at 221.233 kb on - strand at 221.320 kb on + strand at 221.332 kb on - strand at 221.539 kb on + strand, within HP15_236 at 221.570 kb on - strand, within HP15_236 at 221.582 kb on + strand, within HP15_236 at 221.614 kb on + strand, within HP15_236 at 221.624 kb on + strand, within HP15_236 at 221.677 kb on + strand, within HP15_236 at 221.801 kb on + strand, within HP15_236 at 221.872 kb on + strand, within HP15_236 at 221.929 kb on + strand, within HP15_236 at 221.937 kb on - strand, within HP15_236 at 221.937 kb on - strand, within HP15_236 at 221.937 kb on - strand, within HP15_236 at 222.043 kb on + strand, within HP15_236 at 222.048 kb on + strand, within HP15_236 at 222.056 kb on - strand, within HP15_236 at 222.092 kb on + strand, within HP15_236 at 222.150 kb on + strand, within HP15_236 at 222.170 kb on + strand at 222.241 kb on + strand at 222.319 kb on - strand at 222.338 kb on + strand at 222.420 kb on - strand at 222.640 kb on - strand, within HP15_237 at 222.651 kb on - strand, within HP15_237 at 222.665 kb on + strand, within HP15_237 at 222.715 kb on - strand, within HP15_237 at 222.777 kb on + strand, within HP15_237 at 222.843 kb on + strand, within HP15_237 at 222.848 kb on + strand, within HP15_237 at 222.920 kb on + strand, within HP15_237 at 223.035 kb on + strand, within HP15_237 at 223.071 kb on + strand, within HP15_237 at 223.103 kb on - strand, within HP15_237 at 223.108 kb on + strand, within HP15_237 at 223.108 kb on + strand, within HP15_237 at 223.108 kb on + strand, within HP15_237 at 223.189 kb on + strand, within HP15_237
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 221,233 - -0.7 221,320 + -0.1 221,332 - +0.4 221,539 + HP15_236 0.12 -1.5 221,570 - HP15_236 0.16 -0.9 221,582 + HP15_236 0.17 -1.6 221,614 + HP15_236 0.22 -1.0 221,624 + HP15_236 0.23 -2.4 221,677 + HP15_236 0.30 -1.3 221,801 + HP15_236 0.45 -1.5 221,872 + HP15_236 0.54 -0.4 221,929 + HP15_236 0.61 -0.2 221,937 - HP15_236 0.62 -1.2 221,937 - HP15_236 0.62 -1.6 221,937 - HP15_236 0.62 -1.2 222,043 + HP15_236 0.76 -0.5 222,048 + HP15_236 0.77 -0.7 222,056 - HP15_236 0.78 -1.2 222,092 + HP15_236 0.82 -1.3 222,150 + HP15_236 0.89 -0.7 222,170 + -1.7 222,241 + +0.7 222,319 - +1.0 222,338 + -0.4 222,420 - +0.9 222,640 - HP15_237 0.27 +1.3 222,651 - HP15_237 0.28 +1.1 222,665 + HP15_237 0.29 +0.7 222,715 - HP15_237 0.33 +0.8 222,777 + HP15_237 0.38 +1.3 222,843 + HP15_237 0.43 +0.1 222,848 + HP15_237 0.44 +1.0 222,920 + HP15_237 0.49 +1.0 223,035 + HP15_237 0.59 +0.6 223,071 + HP15_237 0.62 +1.3 223,103 - HP15_237 0.64 +1.5 223,108 + HP15_237 0.64 +1.1 223,108 + HP15_237 0.64 +1.3 223,108 + HP15_237 0.64 +2.0 223,189 + HP15_237 0.71 +1.3
Or see this region's nucleotide sequence