Strain Fitness in Marinobacter adhaerens HP15 around HP15_2166

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2165 and HP15_2166 are separated by 28 nucleotidesHP15_2166 and HP15_2167 are separated by 204 nucleotides HP15_2165: HP15_2165 - sigma-54 dependent transcriptional regulator, at 2,271,967 to 2,273,847 _2165 HP15_2166: HP15_2166 - glycerol kinase, at 2,273,876 to 2,275,348 _2166 HP15_2167: HP15_2167 - transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein, at 2,275,553 to 2,276,309 _2167 Position (kb) 2273 2274 2275 2276Strain fitness (log2 ratio) -2 -1 0 1at 2272.932 kb on - strand, within HP15_2165at 2272.942 kb on - strand, within HP15_2165at 2273.024 kb on - strand, within HP15_2165at 2273.131 kb on + strand, within HP15_2165at 2273.139 kb on - strand, within HP15_2165at 2273.181 kb on + strand, within HP15_2165at 2273.189 kb on - strand, within HP15_2165at 2273.235 kb on + strand, within HP15_2165at 2273.375 kb on + strand, within HP15_2165at 2273.410 kb on + strand, within HP15_2165at 2273.410 kb on + strand, within HP15_2165at 2273.419 kb on + strand, within HP15_2165at 2273.651 kb on - strand, within HP15_2165at 2273.657 kb on + strand, within HP15_2165at 2273.657 kb on + strand, within HP15_2165at 2273.665 kb on - strandat 2273.735 kb on - strandat 2273.814 kb on + strandat 2273.814 kb on + strandat 2273.907 kb on + strandat 2273.983 kb on + strandat 2273.993 kb on + strandat 2274.001 kb on - strandat 2274.121 kb on + strand, within HP15_2166at 2274.298 kb on + strand, within HP15_2166at 2274.399 kb on - strand, within HP15_2166at 2274.583 kb on + strand, within HP15_2166at 2274.632 kb on + strand, within HP15_2166at 2274.728 kb on + strand, within HP15_2166at 2274.784 kb on + strand, within HP15_2166at 2274.810 kb on + strand, within HP15_2166at 2274.851 kb on + strand, within HP15_2166at 2274.990 kb on - strand, within HP15_2166at 2274.996 kb on - strand, within HP15_2166at 2274.996 kb on - strand, within HP15_2166at 2275.027 kb on - strand, within HP15_2166at 2275.116 kb on - strand, within HP15_2166at 2275.127 kb on + strand, within HP15_2166at 2275.300 kb on - strandat 2275.300 kb on - strandat 2275.324 kb on - strandat 2275.614 kb on + strandat 2275.643 kb on - strand, within HP15_2167at 2275.649 kb on + strand, within HP15_2167at 2275.649 kb on + strand, within HP15_2167at 2275.708 kb on + strand, within HP15_2167at 2275.828 kb on - strand, within HP15_2167at 2276.029 kb on - strand, within HP15_2167at 2276.188 kb on - strand, within HP15_2167at 2276.295 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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2,272,932 - HP15_2165 0.51 -0.1
2,272,942 - HP15_2165 0.52 -0.5
2,273,024 - HP15_2165 0.56 +0.1
2,273,131 + HP15_2165 0.62 -0.0
2,273,139 - HP15_2165 0.62 +0.5
2,273,181 + HP15_2165 0.65 -0.1
2,273,189 - HP15_2165 0.65 +1.3
2,273,235 + HP15_2165 0.67 -0.8
2,273,375 + HP15_2165 0.75 +0.1
2,273,410 + HP15_2165 0.77 +0.6
2,273,410 + HP15_2165 0.77 -0.9
2,273,419 + HP15_2165 0.77 -0.6
2,273,651 - HP15_2165 0.90 -0.4
2,273,657 + HP15_2165 0.90 -0.1
2,273,657 + HP15_2165 0.90 +0.2
2,273,665 - +0.0
2,273,735 - +0.2
2,273,814 + -0.3
2,273,814 + +0.7
2,273,907 + -1.4
2,273,983 + +0.2
2,273,993 + -0.8
2,274,001 - +0.1
2,274,121 + HP15_2166 0.17 -0.5
2,274,298 + HP15_2166 0.29 -2.4
2,274,399 - HP15_2166 0.36 +0.0
2,274,583 + HP15_2166 0.48 -1.5
2,274,632 + HP15_2166 0.51 -1.1
2,274,728 + HP15_2166 0.58 -0.4
2,274,784 + HP15_2166 0.62 -1.2
2,274,810 + HP15_2166 0.63 -0.9
2,274,851 + HP15_2166 0.66 -1.5
2,274,990 - HP15_2166 0.76 -1.4
2,274,996 - HP15_2166 0.76 -1.9
2,274,996 - HP15_2166 0.76 -1.4
2,275,027 - HP15_2166 0.78 -0.6
2,275,116 - HP15_2166 0.84 -1.8
2,275,127 + HP15_2166 0.85 -0.5
2,275,300 - -2.4
2,275,300 - -1.2
2,275,324 - -1.3
2,275,614 + -0.5
2,275,643 - HP15_2167 0.12 -1.6
2,275,649 + HP15_2167 0.13 +0.3
2,275,649 + HP15_2167 0.13 -1.2
2,275,708 + HP15_2167 0.20 -1.9
2,275,828 - HP15_2167 0.36 -1.1
2,276,029 - HP15_2167 0.63 -1.4
2,276,188 - HP15_2167 0.84 -0.7
2,276,295 - -0.4

Or see this region's nucleotide sequence