Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2165 and HP15_2166 are separated by 28 nucleotides HP15_2166 and HP15_2167 are separated by 204 nucleotides
HP15_2165: HP15_2165 - sigma-54 dependent transcriptional regulator, at 2,271,967 to 2,273,847
_2165
HP15_2166: HP15_2166 - glycerol kinase, at 2,273,876 to 2,275,348
_2166
HP15_2167: HP15_2167 - transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein, at 2,275,553 to 2,276,309
_2167
Position (kb)
2273
2274
2275
2276 Strain fitness (log2 ratio)
-2
-1
0
1 at 2272.932 kb on - strand, within HP15_2165 at 2272.942 kb on - strand, within HP15_2165 at 2273.024 kb on - strand, within HP15_2165 at 2273.131 kb on + strand, within HP15_2165 at 2273.139 kb on - strand, within HP15_2165 at 2273.181 kb on + strand, within HP15_2165 at 2273.189 kb on - strand, within HP15_2165 at 2273.235 kb on + strand, within HP15_2165 at 2273.375 kb on + strand, within HP15_2165 at 2273.410 kb on + strand, within HP15_2165 at 2273.410 kb on + strand, within HP15_2165 at 2273.419 kb on + strand, within HP15_2165 at 2273.651 kb on - strand, within HP15_2165 at 2273.657 kb on + strand, within HP15_2165 at 2273.657 kb on + strand, within HP15_2165 at 2273.665 kb on - strand at 2273.735 kb on - strand at 2273.814 kb on + strand at 2273.814 kb on + strand at 2273.907 kb on + strand at 2273.983 kb on + strand at 2273.993 kb on + strand at 2274.001 kb on - strand at 2274.121 kb on + strand, within HP15_2166 at 2274.298 kb on + strand, within HP15_2166 at 2274.399 kb on - strand, within HP15_2166 at 2274.583 kb on + strand, within HP15_2166 at 2274.632 kb on + strand, within HP15_2166 at 2274.728 kb on + strand, within HP15_2166 at 2274.784 kb on + strand, within HP15_2166 at 2274.810 kb on + strand, within HP15_2166 at 2274.851 kb on + strand, within HP15_2166 at 2274.990 kb on - strand, within HP15_2166 at 2274.996 kb on - strand, within HP15_2166 at 2274.996 kb on - strand, within HP15_2166 at 2275.027 kb on - strand, within HP15_2166 at 2275.116 kb on - strand, within HP15_2166 at 2275.127 kb on + strand, within HP15_2166 at 2275.300 kb on - strand at 2275.300 kb on - strand at 2275.324 kb on - strand at 2275.614 kb on + strand at 2275.643 kb on - strand, within HP15_2167 at 2275.649 kb on + strand, within HP15_2167 at 2275.649 kb on + strand, within HP15_2167 at 2275.708 kb on + strand, within HP15_2167 at 2275.828 kb on - strand, within HP15_2167 at 2276.029 kb on - strand, within HP15_2167 at 2276.188 kb on - strand, within HP15_2167 at 2276.295 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,272,932 - HP15_2165 0.51 -0.1 2,272,942 - HP15_2165 0.52 -0.5 2,273,024 - HP15_2165 0.56 +0.1 2,273,131 + HP15_2165 0.62 -0.0 2,273,139 - HP15_2165 0.62 +0.5 2,273,181 + HP15_2165 0.65 -0.1 2,273,189 - HP15_2165 0.65 +1.3 2,273,235 + HP15_2165 0.67 -0.8 2,273,375 + HP15_2165 0.75 +0.1 2,273,410 + HP15_2165 0.77 +0.6 2,273,410 + HP15_2165 0.77 -0.9 2,273,419 + HP15_2165 0.77 -0.6 2,273,651 - HP15_2165 0.90 -0.4 2,273,657 + HP15_2165 0.90 -0.1 2,273,657 + HP15_2165 0.90 +0.2 2,273,665 - +0.0 2,273,735 - +0.2 2,273,814 + -0.3 2,273,814 + +0.7 2,273,907 + -1.4 2,273,983 + +0.2 2,273,993 + -0.8 2,274,001 - +0.1 2,274,121 + HP15_2166 0.17 -0.5 2,274,298 + HP15_2166 0.29 -2.4 2,274,399 - HP15_2166 0.36 +0.0 2,274,583 + HP15_2166 0.48 -1.5 2,274,632 + HP15_2166 0.51 -1.1 2,274,728 + HP15_2166 0.58 -0.4 2,274,784 + HP15_2166 0.62 -1.2 2,274,810 + HP15_2166 0.63 -0.9 2,274,851 + HP15_2166 0.66 -1.5 2,274,990 - HP15_2166 0.76 -1.4 2,274,996 - HP15_2166 0.76 -1.9 2,274,996 - HP15_2166 0.76 -1.4 2,275,027 - HP15_2166 0.78 -0.6 2,275,116 - HP15_2166 0.84 -1.8 2,275,127 + HP15_2166 0.85 -0.5 2,275,300 - -2.4 2,275,300 - -1.2 2,275,324 - -1.3 2,275,614 + -0.5 2,275,643 - HP15_2167 0.12 -1.6 2,275,649 + HP15_2167 0.13 +0.3 2,275,649 + HP15_2167 0.13 -1.2 2,275,708 + HP15_2167 0.20 -1.9 2,275,828 - HP15_2167 0.36 -1.1 2,276,029 - HP15_2167 0.63 -1.4 2,276,188 - HP15_2167 0.84 -0.7 2,276,295 - -0.4
Or see this region's nucleotide sequence