Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2164 and HP15_2165 are separated by 334 nucleotides HP15_2165 and HP15_2166 are separated by 28 nucleotides
HP15_2164: HP15_2164 - ATP-binding protein of sugar ABC transporter, at 2,270,538 to 2,271,632
_2164
HP15_2165: HP15_2165 - sigma-54 dependent transcriptional regulator, at 2,271,967 to 2,273,847
_2165
HP15_2166: HP15_2166 - glycerol kinase, at 2,273,876 to 2,275,348
_2166
Position (kb)
2271
2272
2273
2274 Strain fitness (log2 ratio)
-2
-1
0
1 at 2271.072 kb on + strand, within HP15_2164 at 2271.074 kb on + strand, within HP15_2164 at 2271.082 kb on - strand, within HP15_2164 at 2271.084 kb on - strand, within HP15_2164 at 2271.115 kb on + strand, within HP15_2164 at 2271.201 kb on + strand, within HP15_2164 at 2271.209 kb on - strand, within HP15_2164 at 2271.216 kb on - strand, within HP15_2164 at 2271.218 kb on + strand, within HP15_2164 at 2271.234 kb on - strand, within HP15_2164 at 2271.260 kb on - strand, within HP15_2164 at 2271.362 kb on + strand, within HP15_2164 at 2271.484 kb on - strand, within HP15_2164 at 2271.484 kb on - strand, within HP15_2164 at 2271.521 kb on + strand, within HP15_2164 at 2271.620 kb on + strand at 2271.628 kb on - strand at 2271.674 kb on + strand at 2271.896 kb on + strand at 2272.093 kb on - strand at 2272.127 kb on - strand at 2272.175 kb on + strand, within HP15_2165 at 2272.243 kb on + strand, within HP15_2165 at 2272.251 kb on - strand, within HP15_2165 at 2272.389 kb on + strand, within HP15_2165 at 2272.468 kb on - strand, within HP15_2165 at 2272.506 kb on + strand, within HP15_2165 at 2272.514 kb on - strand, within HP15_2165 at 2272.653 kb on + strand, within HP15_2165 at 2272.668 kb on + strand, within HP15_2165 at 2272.932 kb on - strand, within HP15_2165 at 2272.942 kb on - strand, within HP15_2165 at 2273.024 kb on - strand, within HP15_2165 at 2273.131 kb on + strand, within HP15_2165 at 2273.139 kb on - strand, within HP15_2165 at 2273.181 kb on + strand, within HP15_2165 at 2273.189 kb on - strand, within HP15_2165 at 2273.235 kb on + strand, within HP15_2165 at 2273.375 kb on + strand, within HP15_2165 at 2273.410 kb on + strand, within HP15_2165 at 2273.410 kb on + strand, within HP15_2165 at 2273.419 kb on + strand, within HP15_2165 at 2273.651 kb on - strand, within HP15_2165 at 2273.657 kb on + strand, within HP15_2165 at 2273.657 kb on + strand, within HP15_2165 at 2273.665 kb on - strand at 2273.735 kb on - strand at 2273.814 kb on + strand at 2273.814 kb on + strand at 2273.907 kb on + strand at 2273.983 kb on + strand at 2273.993 kb on + strand at 2274.001 kb on - strand at 2274.121 kb on + strand, within HP15_2166 at 2274.298 kb on + strand, within HP15_2166 at 2274.399 kb on - strand, within HP15_2166 at 2274.583 kb on + strand, within HP15_2166 at 2274.632 kb on + strand, within HP15_2166 at 2274.728 kb on + strand, within HP15_2166 at 2274.784 kb on + strand, within HP15_2166 at 2274.810 kb on + strand, within HP15_2166
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,271,072 + HP15_2164 0.49 +0.3 2,271,074 + HP15_2164 0.49 -0.4 2,271,082 - HP15_2164 0.50 +1.2 2,271,084 - HP15_2164 0.50 +0.2 2,271,115 + HP15_2164 0.53 +0.1 2,271,201 + HP15_2164 0.61 +0.6 2,271,209 - HP15_2164 0.61 -1.0 2,271,216 - HP15_2164 0.62 +0.3 2,271,218 + HP15_2164 0.62 +0.5 2,271,234 - HP15_2164 0.64 +0.3 2,271,260 - HP15_2164 0.66 +0.2 2,271,362 + HP15_2164 0.75 +0.5 2,271,484 - HP15_2164 0.86 +1.2 2,271,484 - HP15_2164 0.86 +0.4 2,271,521 + HP15_2164 0.90 +1.0 2,271,620 + -0.3 2,271,628 - +0.0 2,271,674 + +0.3 2,271,896 + -0.2 2,272,093 - +0.3 2,272,127 - +0.4 2,272,175 + HP15_2165 0.11 +0.6 2,272,243 + HP15_2165 0.15 +0.2 2,272,251 - HP15_2165 0.15 -0.2 2,272,389 + HP15_2165 0.22 +1.0 2,272,468 - HP15_2165 0.27 +0.1 2,272,506 + HP15_2165 0.29 +0.3 2,272,514 - HP15_2165 0.29 +0.1 2,272,653 + HP15_2165 0.36 +0.5 2,272,668 + HP15_2165 0.37 -0.7 2,272,932 - HP15_2165 0.51 -0.1 2,272,942 - HP15_2165 0.52 -0.5 2,273,024 - HP15_2165 0.56 +0.1 2,273,131 + HP15_2165 0.62 -0.0 2,273,139 - HP15_2165 0.62 +0.5 2,273,181 + HP15_2165 0.65 -0.1 2,273,189 - HP15_2165 0.65 +1.3 2,273,235 + HP15_2165 0.67 -0.8 2,273,375 + HP15_2165 0.75 +0.1 2,273,410 + HP15_2165 0.77 +0.6 2,273,410 + HP15_2165 0.77 -0.9 2,273,419 + HP15_2165 0.77 -0.6 2,273,651 - HP15_2165 0.90 -0.4 2,273,657 + HP15_2165 0.90 -0.1 2,273,657 + HP15_2165 0.90 +0.2 2,273,665 - +0.0 2,273,735 - +0.2 2,273,814 + -0.3 2,273,814 + +0.7 2,273,907 + -1.4 2,273,983 + +0.2 2,273,993 + -0.8 2,274,001 - +0.1 2,274,121 + HP15_2166 0.17 -0.5 2,274,298 + HP15_2166 0.29 -2.4 2,274,399 - HP15_2166 0.36 +0.0 2,274,583 + HP15_2166 0.48 -1.5 2,274,632 + HP15_2166 0.51 -1.1 2,274,728 + HP15_2166 0.58 -0.4 2,274,784 + HP15_2166 0.62 -1.2 2,274,810 + HP15_2166 0.63 -0.9
Or see this region's nucleotide sequence