Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21010

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
2,179,295	+				+0.6
2,179,360	+				-0.2
2,179,368	-				-1.2
2,179,402	+				-0.2
2,179,405	-				-0.4
2,179,412	+				+0.3
2,179,423	+				-1.0
2,179,497	-				-0.0
2,179,501	-				+1.8
2,179,562	-				+2.7
2,179,609	+		PGA1_c21000	0.18	+0.3
2,179,610	-		PGA1_c21000	0.18	+0.9
2,179,612	+		PGA1_c21000	0.19	+1.1
2,179,614	+		PGA1_c21000	0.20	+0.5
2,179,617	-		PGA1_c21000	0.21	+1.4
2,179,617	-		PGA1_c21000	0.21	+1.3
2,179,726	-		PGA1_c21000	0.56	+0.8
2,179,728	-		PGA1_c21000	0.57	+0.8
2,179,745	+		PGA1_c21000	0.62	+1.5
2,179,814	+		PGA1_c21000	0.85	+0.5
2,179,866	+				+0.2
2,180,129	-		PGA1_c21010	0.24	+0.4
2,180,240	-		PGA1_c21010	0.37	+1.6
2,180,275	+		PGA1_c21010	0.41	+1.8
2,180,275	+		PGA1_c21010	0.41	+0.4
2,180,280	+		PGA1_c21010	0.41	-0.0
2,180,283	-		PGA1_c21010	0.42	-1.0
2,180,285	-		PGA1_c21010	0.42	+1.7
2,180,392	+		PGA1_c21010	0.55	+0.5
2,180,397	+		PGA1_c21010	0.55	+0.0
2,180,514	-		PGA1_c21010	0.69	+0.7
2,180,514	-		PGA1_c21010	0.69	+0.9
2,180,514	-		PGA1_c21010	0.69	+0.6
2,180,520	+		PGA1_c21010	0.70	+1.5
2,180,528	-		PGA1_c21010	0.71	+0.6
2,180,567	-		PGA1_c21010	0.75	+0.2
2,180,592	-		PGA1_c21010	0.78	+0.0
2,180,613	+		PGA1_c21010	0.81	+0.8
2,180,621	-		PGA1_c21010	0.82	+0.4
2,180,729	+				+1.6
2,180,743	+				+1.0
2,180,906	+		PGA1_c21020	0.18	-0.5
2,180,929	+		PGA1_c21020	0.21	+0.9
2,180,938	-		PGA1_c21020	0.22	-1.2
2,180,984	+		PGA1_c21020	0.28	+0.3
2,180,984	+		PGA1_c21020	0.28	+0.1
2,181,016	+		PGA1_c21020	0.32	-0.9
2,181,019	-		PGA1_c21020	0.33	-1.6
2,181,062	+		PGA1_c21020	0.38	-0.1
2,181,150	-		PGA1_c21020	0.50	+0.5
2,181,219	+		PGA1_c21020	0.59	+0.2
2,181,281	+		PGA1_c21020	0.67	+0.6
2,181,372	+		PGA1_c21020	0.79	+1.3
2,181,436	+		PGA1_c21020	0.88	+0.8
2,181,444	-		PGA1_c21020	0.89	-0.4
2,181,549	-				-2.4
2,181,597	-		PGA1_c21030	0.12	+1.1
2,181,664	-		PGA1_c21030	0.25	-0.3
2,181,695	+		PGA1_c21030	0.30	-0.9
2,181,695	+		PGA1_c21030	0.30	-0.7