Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16880
Experiment: m.b. Cephalothin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cephalothin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,762,089 | - | PGA1_c16870 | 0.54 | +1.3 | |
1,762,089 | - | PGA1_c16870 | 0.54 | +0.9 | |
1,762,135 | + | PGA1_c16870 | 0.57 | +0.5 | |
1,762,137 | - | PGA1_c16870 | 0.57 | +0.7 | |
1,762,143 | - | PGA1_c16870 | 0.57 | +0.1 | |
1,762,147 | - | PGA1_c16870 | 0.57 | +0.9 | |
1,762,350 | + | PGA1_c16870 | 0.70 | +1.4 | |
1,762,374 | - | PGA1_c16870 | 0.71 | +1.5 | |
1,762,398 | + | PGA1_c16870 | 0.72 | +1.4 | |
1,762,406 | - | PGA1_c16870 | 0.73 | +1.0 | |
1,762,445 | + | PGA1_c16870 | 0.75 | +0.7 | |
1,762,445 | + | PGA1_c16870 | 0.75 | -0.9 | |
1,762,717 | + | +0.5 | |||
1,762,727 | + | +1.1 | |||
1,762,859 | + | +1.0 | |||
1,762,909 | - | +0.1 | |||
1,762,911 | + | +0.4 | |||
1,762,914 | - | -0.7 | |||
1,762,916 | + | +1.0 | |||
1,762,942 | - | +0.9 | |||
1,763,012 | - | -0.4 |
Or see this region's nucleotide sequence