Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13150

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
1,358,735	+		PGA1_c13140	0.17	+0.1
1,358,768	-		PGA1_c13140	0.20	+0.7
1,358,840	+		PGA1_c13140	0.27	-0.4
1,358,840	+		PGA1_c13140	0.27	+0.0
1,358,850	+		PGA1_c13140	0.28	-2.7
1,358,853	-		PGA1_c13140	0.28	+0.2
1,358,858	-		PGA1_c13140	0.29	+0.6
1,358,858	-		PGA1_c13140	0.29	-0.7
1,358,863	-		PGA1_c13140	0.29	-0.4
1,358,866	+		PGA1_c13140	0.29	-0.7
1,358,872	+		PGA1_c13140	0.30	+0.5
1,359,065	-		PGA1_c13140	0.48	-1.4
1,359,072	-		PGA1_c13140	0.49	-0.4
1,359,108	+		PGA1_c13140	0.52	-0.9
1,359,128	+		PGA1_c13140	0.54	+0.2
1,359,136	-		PGA1_c13140	0.55	-0.3
1,359,146	+		PGA1_c13140	0.56	-1.0
1,359,146	+		PGA1_c13140	0.56	-0.4
1,359,146	+		PGA1_c13140	0.56	+1.0
1,359,149	-		PGA1_c13140	0.56	-1.0
1,359,154	-		PGA1_c13140	0.57	-0.1
1,359,164	-		PGA1_c13140	0.58	+1.1
1,359,180	+		PGA1_c13140	0.59	+1.1
1,359,181	+		PGA1_c13140	0.59	-0.9
1,359,198	-		PGA1_c13140	0.61	+0.2
1,359,217	+		PGA1_c13140	0.63	+0.0
1,359,248	+		PGA1_c13140	0.66	-0.0
1,359,275	-		PGA1_c13140	0.68	+0.4
1,359,293	-		PGA1_c13140	0.70	-1.2
1,359,305	-		PGA1_c13140	0.71	+0.7
1,359,344	-		PGA1_c13140	0.75	+2.2
1,359,359	-		PGA1_c13140	0.76	-2.1
1,359,400	+		PGA1_c13140	0.80	-0.0
1,359,400	+		PGA1_c13140	0.80	-0.3
1,359,545	+				-0.2
1,359,549	+				-1.2
1,359,614	-				-0.3
1,359,651	-				-0.4
1,359,656	-				+0.5
1,359,656	-				-0.5
1,359,686	+				+0.3
1,359,686	+				+0.7
1,359,687	+				+0.1
1,359,715	-				-0.2
1,359,822	-				+0.3
1,359,843	+				-0.5
1,359,957	-		PGA1_c13150	0.13	+0.3
1,359,969	-		PGA1_c13150	0.14	+0.3
1,360,059	+		PGA1_c13150	0.19	-0.6
1,360,059	+		PGA1_c13150	0.19	-0.1
1,360,128	+		PGA1_c13150	0.23	+0.3
1,360,136	-		PGA1_c13150	0.23	+0.1
1,360,136	-		PGA1_c13150	0.23	-1.2
1,360,136	-		PGA1_c13150	0.23	+0.2
1,360,136	-		PGA1_c13150	0.23	-0.1
1,360,183	+		PGA1_c13150	0.26	+0.5
1,360,185	+		PGA1_c13150	0.26	+0.1
1,360,185	+		PGA1_c13150	0.26	-0.2
1,360,191	-		PGA1_c13150	0.26	+0.5
1,360,196	-		PGA1_c13150	0.27	-1.5
1,360,286	-		PGA1_c13150	0.32	-0.7
1,360,286	-		PGA1_c13150	0.32	-0.7
1,360,364	-		PGA1_c13150	0.36	-0.3
1,360,412	+		PGA1_c13150	0.39	-0.1
1,360,510	+		PGA1_c13150	0.44	+0.7
1,360,510	+		PGA1_c13150	0.44	+1.3
1,360,547	+		PGA1_c13150	0.46	-0.2
1,360,552	+		PGA1_c13150	0.46	+0.1
1,360,560	-		PGA1_c13150	0.47	-0.6
1,360,560	-		PGA1_c13150	0.47	+0.2
1,360,650	-		PGA1_c13150	0.52	-2.1
1,360,702	+		PGA1_c13150	0.55	+0.1
1,360,710	-		PGA1_c13150	0.55	-2.2
1,360,727	+		PGA1_c13150	0.56	+0.2
1,360,727	+		PGA1_c13150	0.56	+0.4
1,360,730	-		PGA1_c13150	0.56	-0.3
1,360,735	-		PGA1_c13150	0.57	-0.3
1,360,735	-		PGA1_c13150	0.57	-0.2
1,360,735	-		PGA1_c13150	0.57	-1.0
1,360,735	-		PGA1_c13150	0.57	-0.7
1,360,735	-		PGA1_c13150	0.57	+0.3
1,360,779	-		PGA1_c13150	0.59	-1.5
1,360,815	-		PGA1_c13150	0.61	-0.3
1,360,815	-		PGA1_c13150	0.61	-0.6
1,360,859	-		PGA1_c13150	0.64	-0.8
1,360,861	+		PGA1_c13150	0.64	+0.1
1,360,926	-		PGA1_c13150	0.67	+0.2
1,360,942	+		PGA1_c13150	0.68	-0.3
1,360,966	-		PGA1_c13150	0.69	+0.5
1,360,995	+		PGA1_c13150	0.71	-0.3
1,360,995	+		PGA1_c13150	0.71	-0.2
1,360,998	-		PGA1_c13150	0.71	-1.0
1,361,130	-		PGA1_c13150	0.79	-0.2
1,361,158	-		PGA1_c13150	0.80	-0.5
1,361,160	+		PGA1_c13150	0.80	-0.3
1,361,162	+		PGA1_c13150	0.80	-0.5
1,361,168	-		PGA1_c13150	0.81	-1.8
1,361,170	+		PGA1_c13150	0.81	+0.3
1,361,403	-				+1.1
1,361,426	+				-0.5
1,361,444	-				+0.1
1,361,455	+				-1.2
1,361,468	-				+0.1
1,361,545	+				+0.9
1,361,574	+				+0.6
1,361,587	+				+0.1
1,361,607	+				+0.8
1,361,656	+				+0.1
1,361,691	+				-0.3
1,361,798	+		PGA1_c13160	0.16	+0.1
1,361,798	+		PGA1_c13160	0.16	+0.2
1,361,811	+		PGA1_c13160	0.16	+0.6
1,361,828	+		PGA1_c13160	0.18	-2.9
1,361,872	-		PGA1_c13160	0.21	+0.0
1,361,898	-		PGA1_c13160	0.22	-0.1
1,361,918	+		PGA1_c13160	0.24	+0.4
1,361,941	+		PGA1_c13160	0.25	+0.5
1,361,978	+		PGA1_c13160	0.28	+1.0
1,361,981	-		PGA1_c13160	0.28	-0.7
1,361,996	+		PGA1_c13160	0.29	+0.5
1,362,034	+		PGA1_c13160	0.32	+0.6
1,362,130	+		PGA1_c13160	0.38	+0.4
1,362,172	+		PGA1_c13160	0.41	+0.2
1,362,208	+		PGA1_c13160	0.44	-0.4
1,362,208	+		PGA1_c13160	0.44	+0.3
1,362,216	-		PGA1_c13160	0.44	+0.6
1,362,216	-		PGA1_c13160	0.44	-0.2
1,362,251	-		PGA1_c13160	0.46	+0.3
1,362,304	-		PGA1_c13160	0.50	-0.7
1,362,304	-		PGA1_c13160	0.50	-0.0
1,362,304	-		PGA1_c13160	0.50	+0.1
1,362,429	+		PGA1_c13160	0.59	-0.1
1,362,429	+		PGA1_c13160	0.59	+0.5
1,362,445	+		PGA1_c13160	0.60	-0.1
1,362,466	-		PGA1_c13160	0.61	+0.2
1,362,483	-		PGA1_c13160	0.62	-0.6
1,362,491	-		PGA1_c13160	0.63	-1.2
1,362,506	-		PGA1_c13160	0.64	+0.3