Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12760

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
1,320,736	+				+0.1
1,320,882	+		PGA1_c12740	0.39	+0.3
1,320,926	-		PGA1_c12740	0.49	+0.4
1,320,970	-		PGA1_c12740	0.59	+0.6
1,321,057	+		PGA1_c12740	0.79	+1.4
1,321,057	+		PGA1_c12740	0.79	+0.5
1,321,057	+		PGA1_c12740	0.79	+1.7
1,321,057	+		PGA1_c12740	0.79	+0.0
1,321,065	-		PGA1_c12740	0.81	+0.2
1,321,065	-		PGA1_c12740	0.81	+0.2
1,321,088	+		PGA1_c12740	0.86	-0.7
1,321,098	+		PGA1_c12740	0.89	-0.3
1,321,173	-				+1.7
1,321,189	-		PGA1_c12750	0.10	-0.3
1,321,190	-		PGA1_c12750	0.10	+1.8
1,321,225	-		PGA1_c12750	0.18	-2.4
1,321,388	-		PGA1_c12750	0.56	-0.2
1,321,508	+		PGA1_c12750	0.84	-2.4
1,321,530	+		PGA1_c12750	0.90	+0.2
1,321,583	-				-0.2
1,321,602	+				-0.0
1,321,606	-				-1.9
1,321,663	+				-0.9
1,321,668	+				-0.3
1,321,676	-				-0.1
1,321,701	-				+0.6
1,321,729	-				+0.3
1,321,734	-				-1.6
1,321,760	-				-2.6
1,321,760	-				-1.5
1,321,799	-		PGA1_c12760	0.12	-1.0
1,321,837	+		PGA1_c12760	0.16	-0.9
1,321,860	+		PGA1_c12760	0.19	-0.4
1,321,860	+		PGA1_c12760	0.19	-1.6
1,321,860	+		PGA1_c12760	0.19	-1.5
1,321,860	+		PGA1_c12760	0.19	-0.3
1,321,860	+		PGA1_c12760	0.19	-0.3
1,321,860	+		PGA1_c12760	0.19	+0.5
1,321,860	+		PGA1_c12760	0.19	-1.5
1,321,868	-		PGA1_c12760	0.20	+0.3
1,321,868	-		PGA1_c12760	0.20	-0.2
1,321,868	-		PGA1_c12760	0.20	-1.2
1,321,868	-		PGA1_c12760	0.20	-0.7
1,321,868	-		PGA1_c12760	0.20	+0.2
1,321,934	+		PGA1_c12760	0.28	-2.7
1,321,944	-		PGA1_c12760	0.29	-0.6
1,321,997	-		PGA1_c12760	0.35	-2.5
1,322,007	-		PGA1_c12760	0.36	-1.2
1,322,059	+		PGA1_c12760	0.42	-1.2
1,322,067	-		PGA1_c12760	0.43	-1.6
1,322,067	-		PGA1_c12760	0.43	-0.3
1,322,122	-		PGA1_c12760	0.49	-1.7
1,322,128	-		PGA1_c12760	0.50	-0.2
1,322,141	+		PGA1_c12760	0.52	-0.1
1,322,144	-		PGA1_c12760	0.52	-1.9
1,322,149	-		PGA1_c12760	0.53	+0.4
1,322,149	-		PGA1_c12760	0.53	-0.4
1,322,182	+		PGA1_c12760	0.56	-1.3
1,322,182	+		PGA1_c12760	0.56	-0.2
1,322,182	+		PGA1_c12760	0.56	-0.2
1,322,269	-		PGA1_c12760	0.66	-1.7
1,322,269	-		PGA1_c12760	0.66	-0.6
1,322,309	+		PGA1_c12760	0.71	-0.3
1,322,309	+		PGA1_c12760	0.71	+1.2
1,322,316	+		PGA1_c12760	0.72	-0.3
1,322,317	-		PGA1_c12760	0.72	-0.4
1,322,317	-		PGA1_c12760	0.72	+0.2
1,322,317	-		PGA1_c12760	0.72	+0.3
1,322,326	+		PGA1_c12760	0.73	+0.4
1,322,329	-		PGA1_c12760	0.73	+0.0
1,322,334	-		PGA1_c12760	0.74	-0.2
1,322,334	-		PGA1_c12760	0.74	-0.7
1,322,334	-		PGA1_c12760	0.74	+0.2
1,322,382	-		PGA1_c12760	0.80	-1.0
1,322,386	+		PGA1_c12760	0.80	-2.5
1,322,472	+				-0.7
1,322,480	-				-1.6
1,322,513	+				+0.5
1,322,517	+				-1.4
1,322,679	+				+1.0
1,322,687	-				-0.6
1,322,724	-				-0.1
1,322,796	-				-0.6
1,322,817	+				+0.3
1,322,825	-				-0.8
1,322,884	+				+0.6
1,322,884	+				-0.2
1,322,884	+				-0.8
1,322,884	+				+1.1
1,322,884	+				-0.6
1,322,884	+				-0.5
1,322,884	+				-0.5
1,323,000	+		PGA1_c12770	0.41	-1.0
1,323,000	+		PGA1_c12770	0.41	-0.8
1,323,041	-		PGA1_c12770	0.59	-1.0
1,323,140	+				-0.5
1,323,155	+				-0.1
1,323,155	+				-1.2
1,323,180	+				+1.8
1,323,187	+				+1.0
1,323,243	-				+0.6
1,323,270	-				+0.5
1,323,281	-		PGA1_c12780	0.14	-0.3
1,323,355	+		PGA1_c12780	0.47	+1.2
1,323,355	+		PGA1_c12780	0.47	+0.6
1,323,413	-		PGA1_c12780	0.73	-1.7
1,323,487	-				-0.0
1,323,518	-				+0.2
1,323,539	+				+0.1
1,323,552	-				-0.3
1,323,552	-				-1.7
1,323,552	-				-0.5
1,323,554	+				+0.6