Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10970

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
1,134,884	+		PGA1_c10960	0.53	-0.2
1,134,998	+		PGA1_c10960	0.59	+0.2
1,134,998	+		PGA1_c10960	0.59	-2.2
1,134,998	+		PGA1_c10960	0.59	+0.3
1,135,001	-		PGA1_c10960	0.59	-0.0
1,135,087	+		PGA1_c10960	0.64	+0.3
1,135,113	-		PGA1_c10960	0.65	-0.8
1,135,134	+		PGA1_c10960	0.67	+0.4
1,135,183	+		PGA1_c10960	0.69	+0.6
1,135,185	+		PGA1_c10960	0.69	-0.8
1,135,191	-		PGA1_c10960	0.70	+1.0
1,135,238	+		PGA1_c10960	0.72	+0.7
1,135,246	-		PGA1_c10960	0.73	+0.1
1,135,342	+		PGA1_c10960	0.78	+0.3
1,135,434	+		PGA1_c10960	0.83	+0.3
1,135,434	+		PGA1_c10960	0.83	+0.3
1,135,434	+		PGA1_c10960	0.83	-0.0
1,135,434	+		PGA1_c10960	0.83	+0.3
1,135,434	+		PGA1_c10960	0.83	-0.2
1,135,434	+				+0.3
1,135,442	-		PGA1_c10960	0.83	-0.2
1,135,442	-		PGA1_c10960	0.83	-0.0
1,135,442	-		PGA1_c10960	0.83	-0.2
1,135,442	-		PGA1_c10960	0.83	-0.3
1,135,560	+		PGA1_c10960	0.89	+1.8
1,135,560	+		PGA1_c10960	0.89	+0.3
1,135,603	+				+0.6
1,135,603	+				-0.3
1,135,603	+				+0.0
1,135,611	-				+0.7
1,135,611	-				-0.7
1,135,650	+				+0.0
1,135,657	+				+0.6
1,135,658	-				-0.2
1,135,663	-				+0.9
1,135,663	-				+0.3
1,135,663	-				+0.3
1,135,663	-				+0.6
1,135,693	-				-0.3
1,135,776	+				-0.5
1,135,784	-				-0.5
1,135,784	-				-0.4
1,135,828	-				+0.2
1,136,219	+		PGA1_c10970	0.34	+0.8
1,136,246	+		PGA1_c10970	0.36	+0.3
1,136,267	-		PGA1_c10970	0.38	-0.9
1,136,288	-		PGA1_c10970	0.40	+0.4
1,136,288	-		PGA1_c10970	0.40	+2.8
1,136,288	-		PGA1_c10970	0.40	+0.8
1,136,305	+		PGA1_c10970	0.41	-0.3
1,136,313	-		PGA1_c10970	0.42	+0.2
1,136,348	-		PGA1_c10970	0.45	-1.4
1,136,348	-		PGA1_c10970	0.45	+0.4
1,136,408	-		PGA1_c10970	0.51	+0.7
1,136,421	+		PGA1_c10970	0.52	+0.6
1,136,421	+		PGA1_c10970	0.52	-0.0
1,136,451	-		PGA1_c10970	0.55	+1.8
1,136,546	-		PGA1_c10970	0.63	+0.2
1,136,636	+				+1.7
1,136,830	+		PGA1_c10970	0.89	+0.6
1,136,860	+				+0.7
1,136,932	+				-0.2
1,136,979	+				-0.1
1,136,987	-				-2.1
1,136,987	-				+0.9
1,137,059	-				+1.0
1,137,113	+				-0.6
1,137,137	+				+0.9
1,137,137	+				-0.8
1,137,137	+				-0.2
1,137,140	-				-0.4
1,137,145	-				-0.1
1,137,145	-				-2.5
1,137,145	-				+0.8
1,137,145	-				+0.3
1,137,145	-				+0.9
1,137,145	-				-1.9
1,137,184	-				+0.8
1,137,202	-				-0.7
1,137,224	+				-0.0
1,137,306	-				+0.2
1,137,330	-		PGA1_c10980	0.11	+1.0
1,137,366	+		PGA1_c10980	0.14	-0.6
1,137,379	-		PGA1_c10980	0.15	-0.3
1,137,381	+		PGA1_c10980	0.16	+0.7
1,137,482	+		PGA1_c10980	0.24	+0.5
1,137,483	-		PGA1_c10980	0.24	+0.5
1,137,483	-		PGA1_c10980	0.24	-0.5
1,137,483	-		PGA1_c10980	0.24	+0.7
1,137,483	-		PGA1_c10980	0.24	-0.2
1,137,483	-		PGA1_c10980	0.24	+1.3
1,137,483	-		PGA1_c10980	0.24	+0.7
1,137,483	-		PGA1_c10980	0.24	+0.4
1,137,483	-		PGA1_c10980	0.24	-0.2
1,137,492	+		PGA1_c10980	0.25	+0.3
1,137,493	+		PGA1_c10980	0.25	-0.1
1,137,493	+				+0.6
1,137,501	-		PGA1_c10980	0.26	-0.0
1,137,501	-		PGA1_c10980	0.26	+0.1
1,137,501	-		PGA1_c10980	0.26	+1.7
1,137,516	+		PGA1_c10980	0.27	-0.4
1,137,522	-		PGA1_c10980	0.27	+0.0
1,137,546	+		PGA1_c10980	0.29	-0.2
1,137,614	-		PGA1_c10980	0.35	+0.4
1,137,743	+		PGA1_c10980	0.46	+0.0
1,137,750	+		PGA1_c10980	0.47	-0.3
1,137,755	-		PGA1_c10980	0.47	-0.1
1,137,821	-		PGA1_c10980	0.53	-0.5
1,137,886	-		PGA1_c10980	0.58	-1.0
1,137,895	+		PGA1_c10980	0.59	-0.8
1,137,927	+		PGA1_c10980	0.62	+0.8