Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1029 and HP15_1030 are separated by 164 nucleotides HP15_1030 and HP15_1031 are separated by 1 nucleotides HP15_1031 and HP15_1032 overlap by 4 nucleotides
HP15_1029: HP15_1029 - conserved hypothetical protein, membrane, at 1,046,645 to 1,047,925
_1029
HP15_1030: HP15_1030 - sulfate permease family protein, at 1,048,090 to 1,049,577
_1030
HP15_1031: HP15_1031 - UspA domain protein, at 1,049,579 to 1,050,505
_1031
HP15_1032: HP15_1032 - phospholipase, patatin family, at 1,050,502 to 1,051,368
_1032
Position (kb)
1048
1049
1050 Strain fitness (log2 ratio)
-1
0
1
2 at 1047.090 kb on + strand, within HP15_1029 at 1047.090 kb on + strand, within HP15_1029 at 1047.103 kb on - strand, within HP15_1029 at 1047.112 kb on - strand, within HP15_1029 at 1047.210 kb on - strand, within HP15_1029 at 1047.599 kb on + strand, within HP15_1029 at 1047.599 kb on + strand, within HP15_1029 at 1047.607 kb on - strand, within HP15_1029 at 1047.649 kb on - strand, within HP15_1029 at 1047.687 kb on + strand, within HP15_1029 at 1047.692 kb on + strand, within HP15_1029 at 1047.772 kb on - strand, within HP15_1029 at 1047.777 kb on - strand, within HP15_1029 at 1047.819 kb on - strand at 1047.822 kb on + strand at 1047.830 kb on - strand at 1047.830 kb on - strand at 1047.875 kb on + strand at 1047.920 kb on + strand at 1047.949 kb on - strand at 1048.148 kb on - strand at 1048.509 kb on - strand, within HP15_1030 at 1048.593 kb on + strand, within HP15_1030 at 1048.606 kb on + strand, within HP15_1030 at 1048.644 kb on + strand, within HP15_1030 at 1048.734 kb on + strand, within HP15_1030 at 1048.766 kb on - strand, within HP15_1030 at 1048.784 kb on - strand, within HP15_1030 at 1048.846 kb on - strand, within HP15_1030 at 1048.848 kb on + strand, within HP15_1030 at 1048.867 kb on + strand, within HP15_1030 at 1048.867 kb on + strand, within HP15_1030 at 1048.867 kb on + strand, within HP15_1030 at 1048.875 kb on - strand, within HP15_1030 at 1048.875 kb on - strand, within HP15_1030 at 1048.875 kb on - strand, within HP15_1030 at 1048.907 kb on - strand, within HP15_1030 at 1049.180 kb on + strand, within HP15_1030 at 1049.195 kb on + strand, within HP15_1030 at 1049.208 kb on - strand, within HP15_1030 at 1049.232 kb on - strand, within HP15_1030 at 1049.314 kb on + strand, within HP15_1030 at 1049.439 kb on + strand at 1049.442 kb on - strand at 1049.447 kb on - strand at 1049.447 kb on - strand at 1049.447 kb on - strand at 1050.010 kb on - strand, within HP15_1031 at 1050.027 kb on - strand, within HP15_1031 at 1050.034 kb on - strand, within HP15_1031 at 1050.179 kb on + strand, within HP15_1031 at 1050.187 kb on - strand, within HP15_1031 at 1050.247 kb on + strand, within HP15_1031 at 1050.255 kb on - strand, within HP15_1031 at 1050.270 kb on + strand, within HP15_1031 at 1050.288 kb on - strand, within HP15_1031 at 1050.457 kb on - strand at 1050.530 kb on + strand at 1050.530 kb on + strand at 1050.530 kb on + strand at 1050.543 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 1,047,090 + HP15_1029 0.35 +0.0 1,047,090 + HP15_1029 0.35 +0.6 1,047,103 - HP15_1029 0.36 +0.5 1,047,112 - HP15_1029 0.36 +0.1 1,047,210 - HP15_1029 0.44 -0.0 1,047,599 + HP15_1029 0.74 -0.2 1,047,599 + HP15_1029 0.74 -1.0 1,047,607 - HP15_1029 0.75 -0.5 1,047,649 - HP15_1029 0.78 -0.8 1,047,687 + HP15_1029 0.81 +0.0 1,047,692 + HP15_1029 0.82 -0.9 1,047,772 - HP15_1029 0.88 +0.3 1,047,777 - HP15_1029 0.88 +0.2 1,047,819 - +0.7 1,047,822 + -0.1 1,047,830 - -0.1 1,047,830 - +1.5 1,047,875 + +1.2 1,047,920 + +0.3 1,047,949 - -0.6 1,048,148 - +0.7 1,048,509 - HP15_1030 0.28 +0.3 1,048,593 + HP15_1030 0.34 +0.7 1,048,606 + HP15_1030 0.35 +0.7 1,048,644 + HP15_1030 0.37 +0.7 1,048,734 + HP15_1030 0.43 +0.9 1,048,766 - HP15_1030 0.45 +0.6 1,048,784 - HP15_1030 0.47 +0.5 1,048,846 - HP15_1030 0.51 +0.5 1,048,848 + HP15_1030 0.51 +0.6 1,048,867 + HP15_1030 0.52 +1.0 1,048,867 + HP15_1030 0.52 -0.5 1,048,867 + HP15_1030 0.52 +0.7 1,048,875 - HP15_1030 0.53 +0.5 1,048,875 - HP15_1030 0.53 +2.0 1,048,875 - HP15_1030 0.53 +1.1 1,048,907 - HP15_1030 0.55 +0.5 1,049,180 + HP15_1030 0.73 +0.6 1,049,195 + HP15_1030 0.74 +0.5 1,049,208 - HP15_1030 0.75 +0.2 1,049,232 - HP15_1030 0.77 +0.4 1,049,314 + HP15_1030 0.82 +0.7 1,049,439 + +1.2 1,049,442 - +0.3 1,049,447 - +1.8 1,049,447 - +0.4 1,049,447 - +0.6 1,050,010 - HP15_1031 0.46 -0.1 1,050,027 - HP15_1031 0.48 -0.3 1,050,034 - HP15_1031 0.49 -0.2 1,050,179 + HP15_1031 0.65 -0.1 1,050,187 - HP15_1031 0.66 -0.3 1,050,247 + HP15_1031 0.72 -0.1 1,050,255 - HP15_1031 0.73 +0.2 1,050,270 + HP15_1031 0.75 -0.6 1,050,288 - HP15_1031 0.76 +0.1 1,050,457 - -0.5 1,050,530 + -0.1 1,050,530 + -0.6 1,050,530 + +0.3 1,050,543 - -0.1
Or see this region's nucleotide sequence