Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_103 and HP15_104 are separated by 30 nucleotides HP15_104 and HP15_105 are separated by 186 nucleotides HP15_105 and HP15_106 are separated by 432 nucleotides
HP15_103: HP15_103 - conserved hypothetical protein, secreted, at 106,039 to 107,577
_103
HP15_104: HP15_104 - integral membrane sensor signal transduction histidine kinase, at 107,608 to 108,921
_104
HP15_105: HP15_105 - conserved hypothetical protein, at 109,108 to 109,308
_105
HP15_106: HP15_106 - conserved hypothetical protein, secreted, at 109,741 to 110,991
_106
Position (kb)
107
108
109 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 106.631 kb on + strand, within HP15_103 at 106.729 kb on + strand, within HP15_103 at 106.732 kb on + strand, within HP15_103 at 106.732 kb on + strand, within HP15_103 at 106.732 kb on + strand, within HP15_103 at 106.732 kb on + strand, within HP15_103 at 106.740 kb on - strand, within HP15_103 at 106.740 kb on - strand, within HP15_103 at 106.740 kb on - strand, within HP15_103 at 106.740 kb on - strand, within HP15_103 at 106.756 kb on - strand, within HP15_103 at 106.895 kb on + strand, within HP15_103 at 106.903 kb on + strand, within HP15_103 at 106.978 kb on + strand, within HP15_103 at 106.978 kb on + strand, within HP15_103 at 106.978 kb on + strand, within HP15_103 at 106.978 kb on + strand, within HP15_103 at 106.981 kb on - strand, within HP15_103 at 106.986 kb on - strand, within HP15_103 at 106.986 kb on - strand, within HP15_103 at 107.027 kb on + strand, within HP15_103 at 107.027 kb on + strand, within HP15_103 at 107.027 kb on + strand, within HP15_103 at 107.027 kb on + strand, within HP15_103 at 107.035 kb on - strand, within HP15_103 at 107.035 kb on - strand, within HP15_103 at 107.035 kb on - strand, within HP15_103 at 107.035 kb on - strand, within HP15_103 at 107.037 kb on + strand, within HP15_103 at 107.037 kb on + strand, within HP15_103 at 107.037 kb on + strand, within HP15_103 at 107.037 kb on + strand, within HP15_103 at 107.045 kb on - strand, within HP15_103 at 107.045 kb on - strand, within HP15_103 at 107.101 kb on + strand, within HP15_103 at 107.101 kb on + strand, within HP15_103 at 107.101 kb on + strand, within HP15_103 at 107.106 kb on + strand, within HP15_103 at 107.109 kb on - strand, within HP15_103 at 107.109 kb on - strand, within HP15_103 at 107.112 kb on + strand, within HP15_103 at 107.114 kb on - strand, within HP15_103 at 107.119 kb on + strand, within HP15_103 at 107.119 kb on + strand, within HP15_103 at 107.127 kb on - strand, within HP15_103 at 107.127 kb on - strand, within HP15_103 at 107.127 kb on - strand, within HP15_103 at 107.185 kb on + strand, within HP15_103 at 107.193 kb on - strand, within HP15_103 at 107.256 kb on - strand, within HP15_103 at 107.264 kb on - strand, within HP15_103 at 107.318 kb on - strand, within HP15_103 at 107.469 kb on + strand at 107.474 kb on + strand at 107.477 kb on - strand at 107.648 kb on + strand at 107.655 kb on - strand at 107.656 kb on - strand at 107.675 kb on + strand at 107.715 kb on + strand at 107.715 kb on + strand at 107.723 kb on - strand at 107.787 kb on + strand, within HP15_104 at 107.793 kb on + strand, within HP15_104 at 107.828 kb on + strand, within HP15_104 at 107.894 kb on + strand, within HP15_104 at 107.950 kb on + strand, within HP15_104 at 107.951 kb on - strand, within HP15_104 at 107.992 kb on - strand, within HP15_104 at 108.002 kb on + strand, within HP15_104 at 108.035 kb on + strand, within HP15_104 at 108.143 kb on - strand, within HP15_104 at 108.164 kb on + strand, within HP15_104 at 108.191 kb on + strand, within HP15_104 at 108.222 kb on + strand, within HP15_104 at 108.316 kb on - strand, within HP15_104 at 108.320 kb on + strand, within HP15_104 at 108.447 kb on + strand, within HP15_104 at 108.673 kb on - strand, within HP15_104 at 108.778 kb on - strand, within HP15_104 at 108.785 kb on + strand, within HP15_104 at 108.839 kb on + strand at 108.916 kb on + strand at 108.925 kb on - strand at 108.985 kb on + strand at 108.993 kb on - strand at 109.328 kb on + strand at 109.328 kb on + strand at 109.351 kb on - strand at 109.374 kb on - strand at 109.412 kb on + strand at 109.420 kb on - strand at 109.496 kb on + strand at 109.515 kb on + strand at 109.607 kb on - strand at 109.607 kb on - strand at 109.635 kb on + strand at 109.648 kb on + strand at 109.756 kb on - strand at 109.778 kb on + strand at 109.792 kb on + strand at 109.814 kb on - strand at 109.816 kb on + strand at 109.851 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 106,631 + HP15_103 0.38 +1.4 106,729 + HP15_103 0.45 -0.9 106,732 + HP15_103 0.45 -0.2 106,732 + HP15_103 0.45 +0.2 106,732 + HP15_103 0.45 +0.7 106,732 + HP15_103 0.45 -1.1 106,740 - HP15_103 0.46 -0.5 106,740 - HP15_103 0.46 -0.2 106,740 - HP15_103 0.46 -0.3 106,740 - HP15_103 0.46 -0.3 106,756 - HP15_103 0.47 -0.0 106,895 + HP15_103 0.56 -1.3 106,903 + HP15_103 0.56 -0.1 106,978 + HP15_103 0.61 -0.1 106,978 + HP15_103 0.61 -0.1 106,978 + HP15_103 0.61 +0.6 106,978 + HP15_103 0.61 +1.0 106,981 - HP15_103 0.61 +0.5 106,986 - HP15_103 0.62 -0.2 106,986 - HP15_103 0.62 +0.1 107,027 + HP15_103 0.64 -1.7 107,027 + HP15_103 0.64 +0.6 107,027 + HP15_103 0.64 -0.2 107,027 + HP15_103 0.64 -0.1 107,035 - HP15_103 0.65 +0.4 107,035 - HP15_103 0.65 +0.9 107,035 - HP15_103 0.65 +0.1 107,035 - HP15_103 0.65 +0.0 107,037 + HP15_103 0.65 -0.1 107,037 + HP15_103 0.65 -0.2 107,037 + HP15_103 0.65 +0.0 107,037 + HP15_103 0.65 +0.7 107,045 - HP15_103 0.65 -0.9 107,045 - HP15_103 0.65 +0.1 107,101 + HP15_103 0.69 +0.4 107,101 + HP15_103 0.69 +0.2 107,101 + HP15_103 0.69 +0.2 107,106 + HP15_103 0.69 +0.8 107,109 - HP15_103 0.70 -0.6 107,109 - HP15_103 0.70 -0.8 107,112 + HP15_103 0.70 +0.2 107,114 - HP15_103 0.70 -0.0 107,119 + HP15_103 0.70 +0.8 107,119 + HP15_103 0.70 -0.3 107,127 - HP15_103 0.71 -0.3 107,127 - HP15_103 0.71 -0.1 107,127 - HP15_103 0.71 -1.2 107,185 + HP15_103 0.74 +0.8 107,193 - HP15_103 0.75 +0.3 107,256 - HP15_103 0.79 -0.2 107,264 - HP15_103 0.80 +0.1 107,318 - HP15_103 0.83 +0.0 107,469 + -0.3 107,474 + +0.4 107,477 - -0.5 107,648 + -0.4 107,655 - -1.5 107,656 - -0.4 107,675 + -0.7 107,715 + -0.4 107,715 + +0.4 107,723 - -0.2 107,787 + HP15_104 0.14 -0.1 107,793 + HP15_104 0.14 +0.5 107,828 + HP15_104 0.17 -0.6 107,894 + HP15_104 0.22 +1.1 107,950 + HP15_104 0.26 +0.6 107,951 - HP15_104 0.26 -0.1 107,992 - HP15_104 0.29 -0.2 108,002 + HP15_104 0.30 +0.3 108,035 + HP15_104 0.32 +0.1 108,143 - HP15_104 0.41 -0.3 108,164 + HP15_104 0.42 -1.1 108,191 + HP15_104 0.44 -0.4 108,222 + HP15_104 0.47 -0.1 108,316 - HP15_104 0.54 +0.3 108,320 + HP15_104 0.54 -0.2 108,447 + HP15_104 0.64 -0.1 108,673 - HP15_104 0.81 -0.3 108,778 - HP15_104 0.89 +0.0 108,785 + HP15_104 0.90 -0.3 108,839 + -0.4 108,916 + +2.0 108,925 - -0.0 108,985 + -0.2 108,993 - +0.2 109,328 + -0.2 109,328 + +0.8 109,351 - -0.1 109,374 - +0.3 109,412 + +0.2 109,420 - +0.0 109,496 + -2.1 109,515 + -0.6 109,607 - +0.1 109,607 - +0.0 109,635 + -0.1 109,648 + +0.2 109,756 - +0.5 109,778 + -0.4 109,792 + +0.6 109,814 - -0.8 109,816 + +0.2 109,851 + -0.3
Or see this region's nucleotide sequence