Experiment: MoLS4 with L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2964 and DVU2965 are separated by 119 nucleotides DVU2965 and DVU2966 are separated by 198 nucleotides DVU2966 and DVU2967 are separated by 13 nucleotides
DVU2964: DVU2964 - hypothetical protein (TIGR), at 3,070,855 to 3,071,514
DVU2964
DVU2965: DVU2965 - hypothetical protein (TIGR), at 3,071,634 to 3,071,933
DVU2965
DVU2966: DVU2966 - response regulator (TIGR), at 3,072,132 to 3,072,587
DVU2966
DVU2967: DVU2967 - sensor histidine kinase/response regulator (TIGR), at 3,072,601 to 3,073,725
DVU2967
Position (kb)
3072
3073 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3071.218 kb on - strand, within DVU2964 at 3071.224 kb on - strand, within DVU2964 at 3071.812 kb on + strand, within DVU2965 at 3071.812 kb on + strand, within DVU2965 at 3071.828 kb on - strand, within DVU2965 at 3071.865 kb on + strand, within DVU2965 at 3071.865 kb on - strand, within DVU2965 at 3071.875 kb on + strand, within DVU2965 at 3071.883 kb on - strand, within DVU2965 at 3071.916 kb on - strand at 3071.916 kb on - strand at 3071.916 kb on - strand at 3071.977 kb on - strand at 3071.978 kb on + strand at 3071.994 kb on - strand at 3072.001 kb on + strand at 3072.009 kb on - strand at 3072.022 kb on - strand at 3072.122 kb on - strand at 3072.129 kb on + strand at 3072.147 kb on - strand at 3072.178 kb on + strand, within DVU2966 at 3072.226 kb on - strand, within DVU2966 at 3072.275 kb on + strand, within DVU2966 at 3072.319 kb on + strand, within DVU2966 at 3072.319 kb on + strand, within DVU2966 at 3072.327 kb on + strand, within DVU2966 at 3072.335 kb on - strand, within DVU2966 at 3072.352 kb on + strand, within DVU2966 at 3072.360 kb on - strand, within DVU2966 at 3072.460 kb on + strand, within DVU2966 at 3072.507 kb on - strand, within DVU2966 at 3072.517 kb on - strand, within DVU2966 at 3072.520 kb on + strand, within DVU2966 at 3072.562 kb on - strand at 3072.587 kb on + strand at 3072.595 kb on - strand at 3072.595 kb on - strand at 3072.677 kb on - strand at 3072.717 kb on + strand, within DVU2967 at 3072.776 kb on + strand, within DVU2967 at 3072.842 kb on + strand, within DVU2967 at 3072.842 kb on + strand, within DVU2967 at 3072.876 kb on + strand, within DVU2967 at 3072.905 kb on - strand, within DVU2967 at 3072.905 kb on - strand, within DVU2967 at 3072.927 kb on - strand, within DVU2967 at 3073.090 kb on - strand, within DVU2967 at 3073.135 kb on + strand, within DVU2967 at 3073.152 kb on + strand, within DVU2967 at 3073.220 kb on + strand, within DVU2967 at 3073.220 kb on + strand, within DVU2967 at 3073.226 kb on + strand, within DVU2967 at 3073.228 kb on - strand, within DVU2967 at 3073.248 kb on - strand, within DVU2967 at 3073.263 kb on - strand, within DVU2967 at 3073.273 kb on + strand, within DVU2967 at 3073.306 kb on + strand, within DVU2967 at 3073.318 kb on + strand, within DVU2967 at 3073.349 kb on - strand, within DVU2967 at 3073.349 kb on - strand, within DVU2967 at 3073.582 kb on + strand, within DVU2967
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Lysine (N) remove 3,071,218 - DVU2964 0.55 -1.5 3,071,224 - DVU2964 0.56 -0.6 3,071,812 + DVU2965 0.59 -0.1 3,071,812 + DVU2965 0.59 -2.2 3,071,828 - DVU2965 0.65 -0.7 3,071,865 + DVU2965 0.77 -0.7 3,071,865 - DVU2965 0.77 -0.0 3,071,875 + DVU2965 0.80 -1.1 3,071,883 - DVU2965 0.83 +0.6 3,071,916 - +0.0 3,071,916 - -0.6 3,071,916 - -0.5 3,071,977 - -0.9 3,071,978 + -0.2 3,071,994 - +0.8 3,072,001 + +0.0 3,072,009 - -0.3 3,072,022 - -0.2 3,072,122 - -0.9 3,072,129 + -2.7 3,072,147 - -3.4 3,072,178 + DVU2966 0.10 -3.0 3,072,226 - DVU2966 0.21 -3.9 3,072,275 + DVU2966 0.31 -2.5 3,072,319 + DVU2966 0.41 -1.9 3,072,319 + DVU2966 0.41 -2.5 3,072,327 + DVU2966 0.43 -2.8 3,072,335 - DVU2966 0.45 -3.3 3,072,352 + DVU2966 0.48 -0.9 3,072,360 - DVU2966 0.50 -2.0 3,072,460 + DVU2966 0.72 -1.2 3,072,507 - DVU2966 0.82 -2.0 3,072,517 - DVU2966 0.84 -2.7 3,072,520 + DVU2966 0.85 -3.3 3,072,562 - -3.0 3,072,587 + -3.6 3,072,595 - -3.1 3,072,595 - -1.9 3,072,677 - -2.2 3,072,717 + DVU2967 0.10 -2.5 3,072,776 + DVU2967 0.16 -3.0 3,072,842 + DVU2967 0.21 -2.1 3,072,842 + DVU2967 0.21 -2.1 3,072,876 + DVU2967 0.24 -2.2 3,072,905 - DVU2967 0.27 -2.1 3,072,905 - DVU2967 0.27 -1.9 3,072,927 - DVU2967 0.29 -3.6 3,073,090 - DVU2967 0.43 -1.8 3,073,135 + DVU2967 0.47 -0.4 3,073,152 + DVU2967 0.49 -1.0 3,073,220 + DVU2967 0.55 -0.7 3,073,220 + DVU2967 0.55 -0.6 3,073,226 + DVU2967 0.56 -1.0 3,073,228 - DVU2967 0.56 -0.7 3,073,248 - DVU2967 0.58 +0.2 3,073,263 - DVU2967 0.59 -1.8 3,073,273 + DVU2967 0.60 -0.3 3,073,306 + DVU2967 0.63 -0.8 3,073,318 + DVU2967 0.64 -0.5 3,073,349 - DVU2967 0.66 +1.1 3,073,349 - DVU2967 0.66 -0.7 3,073,582 + DVU2967 0.87 +0.1
Or see this region's nucleotide sequence