Strain Fitness in Pantoea sp. MT58 around IAI47_17730

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
3,765,730	+		IAI47_17725	0.46	+0.1
3,765,730	+		IAI47_17725	0.46	+0.4
3,765,730	+		IAI47_17725	0.46	-0.1
3,765,731	-		IAI47_17725	0.46	-0.5
3,765,731	-		IAI47_17725	0.46	+0.0
3,765,760	+		IAI47_17725	0.47	-1.0
3,765,760	+		IAI47_17725	0.47	+0.7
3,765,761	-		IAI47_17725	0.47	-1.3
3,765,761	-		IAI47_17725	0.47	-0.6
3,765,761	-		IAI47_17725	0.47	-0.1
3,765,799	+		IAI47_17725	0.50	+0.6
3,765,863	-		IAI47_17725	0.54	+0.8
3,765,889	+		IAI47_17725	0.55	+0.3
3,765,896	+		IAI47_17725	0.56	-0.7
3,765,896	+		IAI47_17725	0.56	+0.4
3,765,896	+		IAI47_17725	0.56	-0.2
3,765,902	+		IAI47_17725	0.56	-1.5
3,765,902	+		IAI47_17725	0.56	-0.6
3,765,902	+		IAI47_17725	0.56	+0.3
3,765,902	+		IAI47_17725	0.56	+1.5
3,765,903	-		IAI47_17725	0.56	+0.9
3,765,903	-		IAI47_17725	0.56	-1.3
3,765,903	-		IAI47_17725	0.56	-0.1
3,765,903	-		IAI47_17725	0.56	-0.2
3,765,917	-		IAI47_17725	0.57	-0.5
3,765,917	-		IAI47_17725	0.57	+1.0
3,765,917	-		IAI47_17725	0.57	-0.8
3,765,917	-		IAI47_17725	0.57	+0.3
3,765,917	-		IAI47_17725	0.57	+0.9
3,765,917	-		IAI47_17725	0.57	+0.2
3,765,917	-		IAI47_17725	0.57	-1.6
3,765,917	-		IAI47_17725	0.57	-0.1
3,765,953	-		IAI47_17725	0.59	-0.7
3,765,964	+		IAI47_17725	0.60	+0.2
3,765,965	-		IAI47_17725	0.60	-0.3
3,766,000	+		IAI47_17725	0.62	+1.0
3,766,000	+		IAI47_17725	0.62	-1.7
3,766,001	-		IAI47_17725	0.62	-0.2
3,766,001	-		IAI47_17725	0.62	-1.2
3,766,054	+		IAI47_17725	0.65	+0.8
3,766,139	+		IAI47_17725	0.70	-3.0
3,766,139	+		IAI47_17725	0.70	-0.9
3,766,139	+		IAI47_17725	0.70	+0.2
3,766,140	-		IAI47_17725	0.70	-0.4
3,766,140	-		IAI47_17725	0.70	-0.5
3,766,152	-		IAI47_17725	0.71	-0.3
3,766,196	-		IAI47_17725	0.74	+0.4
3,766,229	-		IAI47_17725	0.76	-0.8
3,766,241	-		IAI47_17725	0.76	+0.3
3,766,270	+		IAI47_17725	0.78	-0.4
3,766,270	+		IAI47_17725	0.78	-0.5
3,766,271	-		IAI47_17725	0.78	-0.6
3,766,271	-		IAI47_17725	0.78	-1.2
3,766,271	-		IAI47_17725	0.78	+0.9
3,766,306	+		IAI47_17725	0.80	-0.3
3,766,306	+		IAI47_17725	0.80	+0.1
3,766,306	+		IAI47_17725	0.80	+0.5
3,766,306	+		IAI47_17725	0.80	-0.1
3,766,307	-		IAI47_17725	0.80	-0.4
3,766,307	-		IAI47_17725	0.80	-1.5
3,766,334	+		IAI47_17725	0.82	-0.3
3,766,334	+		IAI47_17725	0.82	+1.1
3,766,334	+		IAI47_17725	0.82	+0.7
3,766,335	-		IAI47_17725	0.82	+0.5
3,766,335	-		IAI47_17725	0.82	+1.4
3,766,335	-		IAI47_17725	0.82	+1.0
3,766,335	-		IAI47_17725	0.82	-0.1
3,766,335	-		IAI47_17725	0.82	+1.4
3,766,335	-		IAI47_17725	0.82	-0.7
3,766,335	-		IAI47_17725	0.82	-0.9
3,766,466	+				-0.5
3,766,467	-				+0.5
3,766,473	-				-1.3
3,766,473	-				-0.4
3,766,494	+				-0.8
3,766,494	+				+1.1
3,766,495	-				-0.6
3,766,495	-				+0.1
3,766,495	-				+1.7
3,766,495	-				+1.5
3,766,582	+				-1.1
3,766,582	+				-0.2
3,766,582	+				-0.6
3,766,618	+				+1.0
3,766,639	+				-0.3
3,766,639	+				-1.3
3,766,648	+				-1.1
3,766,648	+				+0.7
3,766,662	+				-0.4
3,766,663	-				+0.6
3,766,676	+				-1.0
3,766,676	+				+0.0
3,766,677	-				-0.8
3,766,677	-				-2.1
3,766,677	-				-0.2
3,766,684	+				-0.4
3,766,684	+				-0.6
3,766,684	+				-0.1
3,766,685	-				-0.2
3,766,685	-				-0.3
3,766,685	-				-0.4
3,766,738	+				+4.1
3,766,738	+				+0.7
3,766,739	-				-0.3
3,766,739	-				+0.8
3,766,739	-				+2.0
3,766,760	+				-0.9
3,766,761	-				-0.1
3,766,761	-				+0.9
3,766,761	-				-0.6
3,766,795	+		IAI47_17730	0.15	-0.1
3,766,796	-		IAI47_17730	0.15	+2.2
3,766,796	-		IAI47_17730	0.15	+1.5
3,766,796	-		IAI47_17730	0.15	+0.7
3,766,796	-		IAI47_17730	0.15	+0.1
3,766,796	-		IAI47_17730	0.15	+0.3
3,766,796	-		IAI47_17730	0.15	-1.2
3,766,796	-		IAI47_17730	0.15	-0.9
3,766,801	+		IAI47_17730	0.16	-1.5
3,766,817	+		IAI47_17730	0.19	-0.5
3,766,817	+		IAI47_17730	0.19	-1.8
3,766,818	-		IAI47_17730	0.19	-0.0
3,766,818	-		IAI47_17730	0.19	+1.4
3,766,864	+		IAI47_17730	0.28	+0.5
3,766,864	+		IAI47_17730	0.28	+1.3
3,766,864	+		IAI47_17730	0.28	-1.1
3,766,865	-		IAI47_17730	0.28	+0.1
3,766,865	-		IAI47_17730	0.28	-0.2
3,766,865	-		IAI47_17730	0.28	-1.1
3,766,900	+		IAI47_17730	0.34	-0.9
3,766,903	+		IAI47_17730	0.35	-0.6
3,766,903	+		IAI47_17730	0.35	+0.0
3,766,903	+		IAI47_17730	0.35	-0.5
3,766,903	+		IAI47_17730	0.35	-0.2
3,766,903	+		IAI47_17730	0.35	-0.6
3,766,903	+		IAI47_17730	0.35	-0.5
3,766,904	-		IAI47_17730	0.35	+1.0
3,766,904	-		IAI47_17730	0.35	+0.5
3,766,904	-		IAI47_17730	0.35	+0.8
3,766,904	-		IAI47_17730	0.35	+1.3
3,766,906	+		IAI47_17730	0.35	-0.6
3,766,906	+		IAI47_17730	0.35	-0.6
3,766,906	+		IAI47_17730	0.35	+0.9
3,766,906	+		IAI47_17730	0.35	-0.1
3,766,906	+		IAI47_17730	0.35	-0.8
3,766,907	-		IAI47_17730	0.36	+2.4
3,766,907	-		IAI47_17730	0.36	+1.5
3,766,915	+		IAI47_17730	0.37	+0.7
3,766,916	-		IAI47_17730	0.37	+0.4
3,766,916	-		IAI47_17730	0.37	+0.6
3,766,916	-		IAI47_17730	0.37	-0.6
3,766,916	-		IAI47_17730	0.37	+1.1
3,766,916	-		IAI47_17730	0.37	+0.8
3,766,942	+		IAI47_17730	0.42	-2.2
3,766,942	+		IAI47_17730	0.42	-0.6
3,766,942	+		IAI47_17730	0.42	-0.1
3,766,942	+		IAI47_17730	0.42	+0.0
3,766,942	+		IAI47_17730	0.42	-0.2
3,766,942	+		IAI47_17730	0.42	-0.6
3,766,942	+		IAI47_17730	0.42	-0.3
3,766,942	+		IAI47_17730	0.42	-0.6
3,766,943	-		IAI47_17730	0.42	+0.5
3,766,975	-		IAI47_17730	0.48	-0.5
3,767,053	+		IAI47_17730	0.62	+1.3
3,767,053	+		IAI47_17730	0.62	-0.1
3,767,053	+		IAI47_17730	0.62	+1.1
3,767,053	+		IAI47_17730	0.62	+1.1
3,767,071	+		IAI47_17730	0.66	+2.7
3,767,071	+		IAI47_17730	0.66	-2.3
3,767,071	+		IAI47_17730	0.66	+0.2
3,767,071	+		IAI47_17730	0.66	+0.4
3,767,071	+		IAI47_17730	0.66	-0.8
3,767,071	+		IAI47_17730	0.66	-0.6
3,767,071	+		IAI47_17730	0.66	+0.3
3,767,072	-		IAI47_17730	0.66	+0.7
3,767,094	-		IAI47_17730	0.70	+0.6
3,767,105	+		IAI47_17730	0.72	+0.8
3,767,106	-		IAI47_17730	0.72	+0.3
3,767,215	-				+0.2
3,767,215	-				+0.5
3,767,252	+				-1.3
3,767,252	+				-1.0
3,767,253	-				+1.0
3,767,253	-				+0.4
3,767,253	-				+0.0
3,767,282	+				+0.3
3,767,282	+				-1.0
3,767,282	+				-1.5
3,767,282	+				+0.4
3,767,283	-				+0.2
3,767,283	-				+1.0
3,767,283	-				+0.3
3,767,283	-				-1.6
3,767,283	-				-2.6
3,767,300	-				+1.6
3,767,340	+				-0.7
3,767,341	-				+0.6
3,767,344	+				-1.7
3,767,351	-				-0.4
3,767,351	-				+0.0
3,767,370	-				+0.8
3,767,395	+				-1.2
3,767,395	+				-0.4
3,767,395	+				-0.2
3,767,396	-				-0.6
3,767,396	-				-1.8
3,767,396	-				-1.0
3,767,396	-				+0.6
3,767,400	+				-0.4
3,767,400	+				+0.5
3,767,400	+				-0.3
3,767,400	+				+0.1
3,767,400	+				-0.1
3,767,400	+				+0.0
3,767,400	+				-0.0
3,767,400	+				-2.0
3,767,400	+				-1.0
3,767,400	+				-1.9
3,767,400	+				+1.6
3,767,400	+				-1.0
3,767,400	+				-0.8
3,767,400	+				-1.3
3,767,400	+				-0.4
3,767,400	+				+0.0
3,767,400	+				-0.9
3,767,400	+				+0.3
3,767,400	+				-0.4
3,767,400	+				+0.8
3,767,401	-				+0.5
3,767,401	-				-0.3
3,767,401	-				+0.4
3,767,401	-				-0.1
3,767,401	-				-1.0
3,767,401	-				-0.1
3,767,401	-				-1.5
3,767,401	-				+0.3
3,767,401	-				+0.1
3,767,401	-				+0.2
3,767,401	-				+0.7
3,767,401	-				-0.7
3,767,401	-				-0.9
3,767,401	-				-1.0
3,767,401	-				-0.7
3,767,401	-				-0.9
3,767,401	-				-0.6
3,767,401	-				-0.7
3,767,401	-				-1.0
3,767,401	-				+0.3
3,767,401	-				-1.0
3,767,401	-				-2.9
3,767,401	-				-0.6
3,767,401	-				+1.6
3,767,401	-				+0.3
3,767,401	-				-0.6
3,767,402	+				-1.0
3,767,402	+				-0.7
3,767,402	+				+0.7
3,767,402	+				+0.4
3,767,402	+				-0.5
3,767,402	+				-0.1
3,767,402	+				+0.4
3,767,402	+				-1.4
3,767,402	+				-0.1
3,767,402	+				-0.5
3,767,402	+				+0.9
3,767,402	+				-0.8
3,767,402	+				-0.8
3,767,402	+				-0.6
3,767,402	+				-0.9
3,767,403	-				-0.5
3,767,403	-				-0.1
3,767,403	-				-0.4
3,767,403	-				-1.9
3,767,403	-				-0.2
3,767,403	-				+0.2
3,767,403	-				-0.2
3,767,403	-				-0.4
3,767,403	-				-0.5
3,767,403	-				-1.0
3,767,403	-				+0.2
3,767,403	-				+0.3
3,767,403	-				-1.3
3,767,450	+				+0.3
3,767,451	-				+0.7
3,767,451	-				+0.1
3,767,451	-				+0.1
3,767,451	-				+0.7
3,767,607	-		IAI47_17735	0.30	+1.4
3,767,701	+		IAI47_17735	0.43	-0.7
3,767,702	-		IAI47_17735	0.44	+0.7
3,767,704	+		IAI47_17735	0.44	+0.1
3,767,704	+		IAI47_17735	0.44	-0.9
3,767,705	-		IAI47_17735	0.44	+0.1
3,767,705	-		IAI47_17735	0.44	+1.5
3,767,705	-		IAI47_17735	0.44	+0.6
3,767,705	-		IAI47_17735	0.44	-0.1
3,767,837	-		IAI47_17735	0.63	-0.0
3,767,837	-		IAI47_17735	0.63	-0.2
3,767,837	-		IAI47_17735	0.63	-0.3
3,767,837	-		IAI47_17735	0.63	-0.6
3,767,839	+		IAI47_17735	0.63	+0.5
3,767,839	+		IAI47_17735	0.63	-0.9
3,767,839	+		IAI47_17735	0.63	-1.4
3,767,839	+		IAI47_17735	0.63	-0.8
3,767,840	-		IAI47_17735	0.63	-1.3
3,767,840	-		IAI47_17735	0.63	+0.6
3,767,856	+		IAI47_17735	0.66	+0.9
3,767,856	+		IAI47_17735	0.66	-0.7
3,767,856	+		IAI47_17735	0.66	-1.6
3,767,857	-		IAI47_17735	0.66	+1.4
3,767,857	-		IAI47_17735	0.66	-0.0
3,767,857	-		IAI47_17735	0.66	-0.8
3,767,857	-		IAI47_17735	0.66	+0.1
3,767,882	-		IAI47_17735	0.69	-2.0
3,767,882	-		IAI47_17735	0.69	-0.5
3,767,925	+		IAI47_17735	0.76	-0.5
3,767,925	+		IAI47_17735	0.76	-0.3
3,767,926	-		IAI47_17735	0.76	-1.9
3,767,926	-		IAI47_17735	0.76	+0.4
3,767,926	-		IAI47_17735	0.76	-1.3
3,767,996	+		IAI47_17735	0.86	-1.5
3,767,996	+		IAI47_17735	0.86	-0.9
3,767,996	+		IAI47_17735	0.86	-1.5
3,768,019	+		IAI47_17735	0.89	-0.0
3,768,020	-		IAI47_17735	0.89	+0.2
3,768,020	-		IAI47_17735	0.89	+0.1
3,768,021	+		IAI47_17735	0.89	-1.0
3,768,021	+		IAI47_17735	0.89	-0.6
3,768,022	-		IAI47_17735	0.90	+0.5
3,768,031	+				-0.1
3,768,031	+				-0.3
3,768,032	-				+1.2
3,768,042	+				-0.4
3,768,042	+				+0.2
3,768,042	+				-0.3
3,768,042	+				+0.5
3,768,042	+				+0.7
3,768,042	+				+0.3
3,768,043	-				+0.9
3,768,043	-				+0.0
3,768,043	-				+1.6
3,768,043	-				+0.1
3,768,043	-				+0.5
3,768,043	-				-0.2
3,768,043	-				+0.8
3,768,043	-				+2.0
3,768,056	-				+0.7
3,768,056	-				-0.6
3,768,082	+				-1.1
3,768,082	+				-0.6
3,768,082	+				-0.6
3,768,083	-				+2.7
3,768,107	+				+1.3
3,768,107	+				+0.8
3,768,130	+		IAI47_17740	0.10	-1.7
3,768,130	+		IAI47_17740	0.10	-0.0
3,768,131	-		IAI47_17740	0.10	+1.4
3,768,131	-		IAI47_17740	0.10	-0.9
3,768,131	-		IAI47_17740	0.10	+1.8
3,768,136	+		IAI47_17740	0.12	-1.3
3,768,137	-		IAI47_17740	0.12	+0.7
3,768,137	-		IAI47_17740	0.12	+0.0
3,768,182	+		IAI47_17740	0.22	-1.2
3,768,238	+		IAI47_17740	0.35	-1.4
3,768,238	+		IAI47_17740	0.35	+0.1
3,768,238	+		IAI47_17740	0.35	-0.2
3,768,238	+		IAI47_17740	0.35	-0.4
3,768,238	+		IAI47_17740	0.35	-0.9
3,768,238	+		IAI47_17740	0.35	-2.2
3,768,239	-		IAI47_17740	0.36	+1.2
3,768,239	-		IAI47_17740	0.36	+0.2