Strain Fitness in Pantoea sp. MT58 around IAI47_16095

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
3,402,927	-		IAI47_16085	0.31	-1.1
3,403,014	+		IAI47_16085	0.42	-1.8
3,403,073	+		IAI47_16085	0.49	+2.5
3,403,130	+		IAI47_16085	0.56	-1.6
3,403,292	+		IAI47_16085	0.76	-0.6
3,403,437	+				-1.6
3,403,488	+				+0.4
3,403,488	+				+0.6
3,403,488	+				+0.6
3,403,489	-				-1.8
3,403,489	-				-0.6
3,403,536	+		IAI47_16090	0.11	+1.0
3,403,536	+		IAI47_16090	0.11	+2.4
3,403,537	-		IAI47_16090	0.11	+0.0
3,403,572	+		IAI47_16090	0.21	+0.7
3,403,572	+		IAI47_16090	0.21	+0.5
3,403,572	+		IAI47_16090	0.21	-1.2
3,403,572	+		IAI47_16090	0.21	+0.2
3,403,572	+		IAI47_16090	0.21	-0.4
3,403,572	+		IAI47_16090	0.21	+0.8
3,403,573	-		IAI47_16090	0.21	+0.4
3,403,573	-		IAI47_16090	0.21	+0.2
3,403,573	-		IAI47_16090	0.21	-0.2
3,403,584	+		IAI47_16090	0.24	+1.5
3,403,584	+		IAI47_16090	0.24	-0.5
3,403,584	+		IAI47_16090	0.24	+0.4
3,403,585	-		IAI47_16090	0.24	-0.7
3,403,585	-		IAI47_16090	0.24	-1.4
3,403,587	-		IAI47_16090	0.25	+0.8
3,403,592	+		IAI47_16090	0.26	+0.5
3,403,592	+		IAI47_16090	0.26	+1.1
3,403,592	+		IAI47_16090	0.26	+1.5
3,403,593	-		IAI47_16090	0.26	+0.0
3,403,649	+		IAI47_16090	0.41	+0.6
3,403,649	+		IAI47_16090	0.41	+1.4
3,403,649	+		IAI47_16090	0.41	+1.1
3,403,650	-		IAI47_16090	0.41	+1.5
3,403,737	+		IAI47_16090	0.64	+0.9
3,403,737	+		IAI47_16090	0.64	-0.5
3,403,788	+		IAI47_16090	0.78	+0.5
3,403,788	+		IAI47_16090	0.78	+0.7
3,403,788	+		IAI47_16090	0.78	-2.1
3,403,788	+		IAI47_16090	0.78	+0.9
3,403,788	+		IAI47_16090	0.78	+0.2
3,403,788	+		IAI47_16090	0.78	+0.9
3,403,789	-		IAI47_16090	0.78	-1.6
3,403,789	-		IAI47_16090	0.78	-1.4
3,403,789	-		IAI47_16090	0.78	-1.7
3,403,789	-		IAI47_16090	0.78	-0.1
3,403,789	-		IAI47_16090	0.78	+0.5
3,403,789	-		IAI47_16090	0.78	+0.2
3,403,789	-		IAI47_16090	0.78	-1.1
3,403,789	-		IAI47_16090	0.78	+0.4
3,403,789	-		IAI47_16090	0.78	+0.6
3,403,789	-		IAI47_16090	0.78	+0.2
3,403,869	+				+1.2
3,403,869	+				+0.0
3,403,869	+				+0.7
3,403,869	+				+0.7
3,403,869	+				+0.9
3,403,870	-				-0.5
3,403,870	-				-1.4
3,403,870	-				-0.8
3,403,870	-				-2.3
3,403,877	-				-1.2
3,403,894	-				-1.2
3,403,894	-				+0.1
3,403,916	+				-0.2
3,403,924	+				+0.6
3,403,925	-				+0.2
3,403,925	-				-0.3
3,403,925	-				-0.6
3,403,934	+				+0.8
3,403,961	+				-0.5
3,403,962	-				+0.7
3,403,972	-				+0.1
3,403,972	-				-1.3
3,404,079	+		IAI47_16095	0.18	-0.1
3,404,145	-		IAI47_16095	0.26	-1.3
3,404,162	-		IAI47_16095	0.28	+0.5
3,404,162	-		IAI47_16095	0.28	-0.8
3,404,164	+		IAI47_16095	0.28	-0.9
3,404,164	+		IAI47_16095	0.28	-1.2
3,404,165	-		IAI47_16095	0.28	+1.1
3,404,165	-		IAI47_16095	0.28	-0.5
3,404,247	+		IAI47_16095	0.38	+0.5
3,404,349	+		IAI47_16095	0.49	-0.1
3,404,366	+		IAI47_16095	0.51	-0.6
3,404,390	+		IAI47_16095	0.54	+0.9
3,404,390	+		IAI47_16095	0.54	-0.1
3,404,391	-		IAI47_16095	0.54	+1.3
3,404,391	-		IAI47_16095	0.54	-1.7
3,404,503	+		IAI47_16095	0.67	+0.5
3,404,503	+		IAI47_16095	0.67	+0.1
3,404,557	+		IAI47_16095	0.74	-1.1
3,404,558	-		IAI47_16095	0.74	-1.3
3,404,558	-		IAI47_16095	0.74	-1.1
3,404,585	+		IAI47_16095	0.77	+0.3
3,404,585	+		IAI47_16095	0.77	+0.5
3,404,586	-		IAI47_16095	0.77	-1.4
3,404,711	+				+0.9
3,404,711	+				-0.1
3,404,711	+				+0.3
3,404,711	+				+1.6
3,404,711	+				-0.7
3,404,711	+				+0.7
3,404,712	-				-1.6
3,404,712	-				-0.6
3,404,712	-				-1.0
3,404,712	-				-2.4
3,404,712	-				-1.1
3,404,712	-				-0.9
3,404,712	-				-0.5
3,404,713	+				+0.1
3,404,713	+				-0.9
3,404,713	+				+0.1
3,404,713	+				+1.5
3,404,713	+				+0.9
3,404,713	+				+1.4
3,404,713	+				+0.0
3,404,714	-				-1.9
3,404,714	-				-2.5
3,404,714	-				-1.6
3,404,714	-				-1.7
3,404,714	-				+0.1
3,404,714	-				-1.3
3,404,714	-				-1.0
3,404,778	+				+1.2
3,404,779	-				-0.7
3,404,779	-				-0.2
3,404,818	+				-1.0
3,404,818	+				-0.3
3,404,818	+				-0.4
3,404,819	-				+0.0
3,404,947	+				-0.5
3,404,947	+				-2.3
3,404,948	-				+0.1
3,405,020	+		IAI47_16100	0.11	-2.6
3,405,033	+		IAI47_16100	0.11	-0.4
3,405,033	+		IAI47_16100	0.11	-1.5
3,405,064	+		IAI47_16100	0.13	-0.8
3,405,064	+		IAI47_16100	0.13	+0.7
3,405,064	+		IAI47_16100	0.13	-2.5
3,405,064	+		IAI47_16100	0.13	-0.3
3,405,065	-		IAI47_16100	0.13	-0.0
3,405,065	-		IAI47_16100	0.13	+0.1
3,405,074	+		IAI47_16100	0.14	-1.1
3,405,074	+		IAI47_16100	0.14	-1.3
3,405,075	-		IAI47_16100	0.14	-1.2
3,405,075	-		IAI47_16100	0.14	-0.1
3,405,075	-		IAI47_16100	0.14	-0.5
3,405,077	+		IAI47_16100	0.14	-0.2
3,405,077	+		IAI47_16100	0.14	-0.9
3,405,082	+		IAI47_16100	0.14	-0.9
3,405,105	+		IAI47_16100	0.15	-1.6
3,405,147	-		IAI47_16100	0.18	+0.1
3,405,147	-		IAI47_16100	0.18	+0.4
3,405,147	-		IAI47_16100	0.18	-0.6
3,405,170	+		IAI47_16100	0.19	-0.8
3,405,170	+		IAI47_16100	0.19	+0.2
3,405,170	+		IAI47_16100	0.19	-2.3
3,405,170	+		IAI47_16100	0.19	-2.8
3,405,170	+		IAI47_16100	0.19	-1.5
3,405,170	+		IAI47_16100	0.19	+2.0
3,405,170	+		IAI47_16100	0.19	-0.8
3,405,171	-		IAI47_16100	0.19	-0.9
3,405,171	-		IAI47_16100	0.19	-0.0
3,405,171	-		IAI47_16100	0.19	+0.0
3,405,171	-		IAI47_16100	0.19	+0.4
3,405,171	-		IAI47_16100	0.19	-1.4
3,405,171	-		IAI47_16100	0.19	+0.0
3,405,176	+		IAI47_16100	0.19	-0.8
3,405,176	+		IAI47_16100	0.19	-1.4
3,405,176	+		IAI47_16100	0.19	+0.3
3,405,177	-		IAI47_16100	0.19	-1.5
3,405,185	-		IAI47_16100	0.20	-1.6
3,405,226	+		IAI47_16100	0.22	-1.6
3,405,226	+		IAI47_16100	0.22	-0.8
3,405,226	+		IAI47_16100	0.22	-1.5
3,405,226	+		IAI47_16100	0.22	-2.0
3,405,226	+		IAI47_16100	0.22	-0.3
3,405,226	+		IAI47_16100	0.22	+0.5
3,405,226	+		IAI47_16100	0.22	-1.4
3,405,226	+		IAI47_16100	0.22	+0.6
3,405,226	+		IAI47_16100	0.22	-2.6
3,405,226	+		IAI47_16100	0.22	-1.5
3,405,226	+		IAI47_16100	0.22	-0.8
3,405,227	-		IAI47_16100	0.22	-0.0
3,405,227	-		IAI47_16100	0.22	-0.9
3,405,227	-		IAI47_16100	0.22	-0.0
3,405,227	-		IAI47_16100	0.22	-0.9
3,405,227	-		IAI47_16100	0.22	-2.2
3,405,227	-		IAI47_16100	0.22	-0.4
3,405,227	-		IAI47_16100	0.22	-0.2
3,405,227	-		IAI47_16100	0.22	-0.5
3,405,227	-		IAI47_16100	0.22	-1.2
3,405,227	-		IAI47_16100	0.22	-0.6
3,405,227	-		IAI47_16100	0.22	-0.8
3,405,227	-		IAI47_16100	0.22	+0.2
3,405,227	-		IAI47_16100	0.22	+0.7
3,405,227	-		IAI47_16100	0.22	+1.5
3,405,230	+		IAI47_16100	0.22	+0.9
3,405,230	+		IAI47_16100	0.22	-0.4
3,405,230	+		IAI47_16100	0.22	-0.9
3,405,230	+		IAI47_16100	0.22	-1.0
3,405,231	-		IAI47_16100	0.22	-0.1
3,405,281	+		IAI47_16100	0.25	-1.1
3,405,293	-		IAI47_16100	0.25	-1.3
3,405,296	+		IAI47_16100	0.25	-1.2
3,405,296	+		IAI47_16100	0.25	+0.2
3,405,352	+		IAI47_16100	0.28	-0.1
3,405,354	-		IAI47_16100	0.29	+0.4
3,405,359	+		IAI47_16100	0.29	-0.6
3,405,359	+		IAI47_16100	0.29	-1.1
3,405,359	+		IAI47_16100	0.29	-1.8
3,405,360	-		IAI47_16100	0.29	+0.2
3,405,373	+		IAI47_16100	0.30	-0.4
3,405,373	+		IAI47_16100	0.30	-0.6
3,405,374	-		IAI47_16100	0.30	-1.0
3,405,374	-		IAI47_16100	0.30	-0.6
3,405,395	+		IAI47_16100	0.31	-0.5
3,405,462	-		IAI47_16100	0.34	+0.9
3,405,462	-		IAI47_16100	0.34	-0.6
3,405,471	-		IAI47_16100	0.35	-1.4
3,405,471	-		IAI47_16100	0.35	-0.9
3,405,485	+		IAI47_16100	0.35	-0.8
3,405,486	-		IAI47_16100	0.36	+1.9
3,405,592	+		IAI47_16100	0.41	-2.2
3,405,592	+		IAI47_16100	0.41	-0.8
3,405,592	+		IAI47_16100	0.41	-0.6
3,405,592	+		IAI47_16100	0.41	+0.2
3,405,593	-		IAI47_16100	0.41	-0.9
3,405,593	-		IAI47_16100	0.41	+0.6
3,405,593	-		IAI47_16100	0.41	-1.8
3,405,593	-		IAI47_16100	0.41	+0.1
3,405,593	-		IAI47_16100	0.41	-1.3
3,405,664	+		IAI47_16100	0.45	-0.9
3,405,664	+		IAI47_16100	0.45	+0.1
3,405,664	+		IAI47_16100	0.45	-1.6
3,405,664	+		IAI47_16100	0.45	-0.4
3,405,664	+		IAI47_16100	0.45	+0.4
3,405,664	+		IAI47_16100	0.45	-1.2
3,405,664	+		IAI47_16100	0.45	+0.4
3,405,664	+		IAI47_16100	0.45	+0.4
3,405,664	+		IAI47_16100	0.45	+0.1
3,405,665	-		IAI47_16100	0.45	-0.2
3,405,665	-		IAI47_16100	0.45	+0.6
3,405,665	-		IAI47_16100	0.45	-3.2
3,405,665	-		IAI47_16100	0.45	+0.0
3,405,665	-		IAI47_16100	0.45	-1.9
3,405,665	-		IAI47_16100	0.45	-0.3
3,405,665	-		IAI47_16100	0.45	-1.1
3,405,665	-		IAI47_16100	0.45	+0.6
3,405,668	+		IAI47_16100	0.45	+0.3
3,405,668	+		IAI47_16100	0.45	+0.4
3,405,668	+		IAI47_16100	0.45	-2.5
3,405,668	+		IAI47_16100	0.45	+0.2
3,405,668	+		IAI47_16100	0.45	-0.1
3,405,668	+		IAI47_16100	0.45	+0.4
3,405,668	+		IAI47_16100	0.45	-1.2
3,405,668	+		IAI47_16100	0.45	-0.4
3,405,668	+		IAI47_16100	0.45	-1.2
3,405,668	+		IAI47_16100	0.45	-1.1
3,405,668	+		IAI47_16100	0.45	-1.2
3,405,668	+		IAI47_16100	0.45	-0.2
3,405,668	+		IAI47_16100	0.45	-1.5
3,405,669	-		IAI47_16100	0.45	+0.9
3,405,669	-		IAI47_16100	0.45	+1.1
3,405,669	-		IAI47_16100	0.45	+0.5
3,405,669	-		IAI47_16100	0.45	-1.8
3,405,669	-		IAI47_16100	0.45	-0.8
3,405,669	-		IAI47_16100	0.45	+0.3
3,405,669	-		IAI47_16100	0.45	+0.2
3,405,669	-		IAI47_16100	0.45	+0.6
3,405,669	-		IAI47_16100	0.45	-2.5
3,405,669	-		IAI47_16100	0.45	+1.3
3,405,669	-		IAI47_16100	0.45	-0.4
3,405,669	-		IAI47_16100	0.45	-0.6
3,405,669	-		IAI47_16100	0.45	-0.5
3,405,669	-		IAI47_16100	0.45	-1.1
3,405,669	-		IAI47_16100	0.45	-0.4
3,405,670	+		IAI47_16100	0.45	-0.2
3,405,670	+		IAI47_16100	0.45	+0.4
3,405,670	+		IAI47_16100	0.45	-1.6
3,405,670	+		IAI47_16100	0.45	-1.5
3,405,670	+		IAI47_16100	0.45	-0.6
3,405,670	+		IAI47_16100	0.45	-1.0
3,405,670	+		IAI47_16100	0.45	-0.6
3,405,670	+		IAI47_16100	0.45	-0.5
3,405,670	+		IAI47_16100	0.45	-0.4
3,405,670	+		IAI47_16100	0.45	-1.2
3,405,670	+		IAI47_16100	0.45	-1.3
3,405,670	+		IAI47_16100	0.45	-0.8
3,405,670	+		IAI47_16100	0.45	+2.1
3,405,670	+		IAI47_16100	0.45	+0.3
3,405,670	+		IAI47_16100	0.45	-0.7
3,405,670	+		IAI47_16100	0.45	+0.5
3,405,670	+		IAI47_16100	0.45	-0.2
3,405,671	-		IAI47_16100	0.45	+0.8
3,405,671	-		IAI47_16100	0.45	+0.4
3,405,671	-		IAI47_16100	0.45	-0.7
3,405,671	-		IAI47_16100	0.45	-0.7
3,405,671	-		IAI47_16100	0.45	+0.2
3,405,671	-		IAI47_16100	0.45	-1.1
3,405,671	-		IAI47_16100	0.45	-0.3
3,405,671	-		IAI47_16100	0.45	+0.7
3,405,671	-		IAI47_16100	0.45	-0.2
3,405,671	-		IAI47_16100	0.45	+0.3
3,405,671	-		IAI47_16100	0.45	-0.2
3,405,671	-		IAI47_16100	0.45	-0.6
3,405,674	+		IAI47_16100	0.45	+0.1
3,405,674	+		IAI47_16100	0.45	+0.1
3,405,674	+		IAI47_16100	0.45	+1.1
3,405,674	+		IAI47_16100	0.45	+0.3
3,405,674	+		IAI47_16100	0.45	-0.1
3,405,674	+		IAI47_16100	0.45	+0.0
3,405,674	+		IAI47_16100	0.45	+0.5
3,405,674	+		IAI47_16100	0.45	+0.6
3,405,674	+		IAI47_16100	0.45	-1.1
3,405,674	+		IAI47_16100	0.45	-0.5
3,405,675	-		IAI47_16100	0.46	-0.8
3,405,675	-		IAI47_16100	0.46	-1.4
3,405,675	-		IAI47_16100	0.46	+0.3
3,405,675	-		IAI47_16100	0.46	+0.8
3,405,675	-		IAI47_16100	0.46	+0.3
3,405,675	-		IAI47_16100	0.46	+0.4
3,405,676	+		IAI47_16100	0.46	-3.6
3,405,676	+		IAI47_16100	0.46	-0.7
3,405,676	+		IAI47_16100	0.46	+0.0
3,405,676	+		IAI47_16100	0.46	-0.7
3,405,676	+		IAI47_16100	0.46	-0.0
3,405,677	-		IAI47_16100	0.46	-0.5
3,405,677	-		IAI47_16100	0.46	-0.2
3,405,677	-		IAI47_16100	0.46	-1.5
3,405,677	-		IAI47_16100	0.46	+0.1
3,405,677	-		IAI47_16100	0.46	-0.6
3,405,677	-		IAI47_16100	0.46	+0.5
3,405,677	-		IAI47_16100	0.46	-0.9
3,405,677	-		IAI47_16100	0.46	-1.1
3,405,703	+		IAI47_16100	0.47	-0.5
3,405,703	+		IAI47_16100	0.47	-0.8
3,405,703	+		IAI47_16100	0.47	+1.5
3,405,703	+		IAI47_16100	0.47	-0.8
3,405,703	+		IAI47_16100	0.47	-0.2
3,405,703	+		IAI47_16100	0.47	-2.9
3,405,703	+		IAI47_16100	0.47	+0.2
3,405,703	+		IAI47_16100	0.47	-0.4
3,405,704	-		IAI47_16100	0.47	-2.3
3,405,704	-		IAI47_16100	0.47	-0.5
3,405,704	-		IAI47_16100	0.47	-0.1
3,405,704	-		IAI47_16100	0.47	-0.0
3,405,704	-		IAI47_16100	0.47	+0.5
3,405,726	-		IAI47_16100	0.48	-0.7