Experiment: m.b. Vancomycin 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09690 and PGA1_c09700 are separated by 214 nucleotides PGA1_c09700 and PGA1_c09710 are separated by 571 nucleotides
PGA1_c09690: PGA1_c09690 - cell division protein FtsZ, at 993,830 to 995,623
_c09690
PGA1_c09700: PGA1_c09700 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC, at 995,838 to 996,773
_c09700
PGA1_c09710: PGA1_c09710 - putative outer membrane assembly lipoprotein, at 997,345 to 998,193
_c09710
Position (kb) 995
996
997 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 995.690 kb on + strand at 995.698 kb on - strand at 995.720 kb on + strand at 996.721 kb on + strand at 996.734 kb on - strand at 996.909 kb on + strand at 996.917 kb on - strand at 996.962 kb on - strand at 996.964 kb on + strand at 997.106 kb on + strand at 997.134 kb on - strand at 997.157 kb on - strand at 997.157 kb on - strand at 997.171 kb on + strand at 997.180 kb on - strand at 997.190 kb on + strand at 997.190 kb on + strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.198 kb on - strand at 997.208 kb on + strand at 997.208 kb on + strand at 997.208 kb on + strand at 997.208 kb on - strand at 997.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.032 mg/ml remove 995,690 + -0.0 995,698 - -0.3 995,720 + -0.2 996,721 + -0.4 996,734 - +0.8 996,909 + +0.1 996,917 - +0.5 996,962 - -0.2 996,964 + -0.1 997,106 + +0.2 997,134 - -0.4 997,157 - +0.2 997,157 - -0.3 997,171 + -0.0 997,180 - -0.4 997,190 + +0.9 997,190 + +0.9 997,198 - -0.4 997,198 - +0.5 997,198 - +0.4 997,198 - -0.5 997,198 - +0.5 997,198 - +0.2 997,198 - +0.2 997,198 - +0.6 997,198 - +0.9 997,198 - -0.6 997,198 - +0.0 997,208 + -2.8 997,208 + -0.3 997,208 + +0.4 997,208 - -0.0 997,216 - -2.3
Or see this region's nucleotide sequence