Strain Fitness in Marinobacter adhaerens HP15 around HP15_801

Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_802 and HP15_801 are separated by 141 nucleotidesHP15_801 and HP15_803 are separated by 26 nucleotidesHP15_803 and HP15_804 overlap by 23 nucleotides HP15_802: HP15_802 - glycerol-3-phosphate acyltransferase, at 815,381 to 817,849 _802 HP15_801: HP15_801 - NADH pyrophosphatase, at 817,991 to 818,818 _801 HP15_803: HP15_803 - glutamate racemase, at 818,845 to 819,678 _803 HP15_804: HP15_804 - protein containing DUF470, at 819,656 to 820,663 _804 Position (kb) 817 818 819Strain fitness (log2 ratio) -2 -1 0 1at 817.011 kb on + strand, within HP15_802at 817.019 kb on + strand, within HP15_802at 817.174 kb on - strand, within HP15_802at 817.178 kb on + strand, within HP15_802at 817.196 kb on + strand, within HP15_802at 817.260 kb on + strand, within HP15_802at 817.268 kb on - strand, within HP15_802at 817.469 kb on + strand, within HP15_802at 817.651 kb on + strandat 817.678 kb on + strandat 817.730 kb on + strandat 817.779 kb on - strandat 817.900 kb on - strandat 818.208 kb on - strand, within HP15_801at 818.567 kb on + strand, within HP15_801at 819.612 kb on + strandat 819.646 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml
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817,011 + HP15_802 0.66 -0.6
817,019 + HP15_802 0.66 +0.8
817,174 - HP15_802 0.73 +0.3
817,178 + HP15_802 0.73 -0.1
817,196 + HP15_802 0.74 +0.0
817,260 + HP15_802 0.76 -0.6
817,268 - HP15_802 0.76 +0.4
817,469 + HP15_802 0.85 +0.1
817,651 + +0.3
817,678 + +0.3
817,730 + +0.5
817,779 - -0.1
817,900 - +0.5
818,208 - HP15_801 0.26 -2.2
818,567 + HP15_801 0.70 -0.0
819,612 + -0.1
819,646 + -0.1

Or see this region's nucleotide sequence