Strain Fitness in Marinobacter adhaerens HP15 around HP15_749

Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_748 and HP15_749 are separated by 9 nucleotidesHP15_749 and HP15_750 are separated by 4 nucleotides HP15_748: HP15_748 - glycerol kinase, at 757,140 to 758,621 _748 HP15_749: HP15_749 - iron(III) ABC transporter, ATP-binding protein, at 758,631 to 759,704 _749 HP15_750: HP15_750 - ornithine carbamoyltransferase, at 759,709 to 760,623 _750 Position (kb) 758 759 760Strain fitness (log2 ratio) -2 -1 0 1at 757.683 kb on - strand, within HP15_748at 757.727 kb on + strand, within HP15_748at 757.735 kb on - strand, within HP15_748at 757.803 kb on + strand, within HP15_748at 757.803 kb on + strand, within HP15_748at 757.887 kb on + strand, within HP15_748at 757.961 kb on + strand, within HP15_748at 758.045 kb on - strand, within HP15_748at 758.070 kb on + strand, within HP15_748at 758.089 kb on + strand, within HP15_748at 758.205 kb on + strand, within HP15_748at 758.390 kb on + strand, within HP15_748at 758.497 kb on + strandat 759.025 kb on + strand, within HP15_749at 759.173 kb on - strand, within HP15_749at 759.270 kb on - strand, within HP15_749at 759.458 kb on + strand, within HP15_749at 760.508 kb on - strand, within HP15_750

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml
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757,683 - HP15_748 0.37 +0.7
757,727 + HP15_748 0.40 +0.9
757,735 - HP15_748 0.40 +0.5
757,803 + HP15_748 0.45 -0.2
757,803 + HP15_748 0.45 -0.7
757,887 + HP15_748 0.50 +0.6
757,961 + HP15_748 0.55 -0.4
758,045 - HP15_748 0.61 -0.4
758,070 + HP15_748 0.63 +1.0
758,089 + HP15_748 0.64 +1.0
758,205 + HP15_748 0.72 +1.2
758,390 + HP15_748 0.84 +1.3
758,497 + +0.9
759,025 + HP15_749 0.37 -1.9
759,173 - HP15_749 0.50 -1.2
759,270 - HP15_749 0.59 -1.5
759,458 + HP15_749 0.77 -1.7
760,508 - HP15_750 0.87 +0.5

Or see this region's nucleotide sequence