Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_633 and HP15_634 are separated by 27 nucleotides HP15_634 and HP15_635 are separated by 139 nucleotides HP15_635 and HP15_636 are separated by 160 nucleotides
HP15_633: HP15_633 - dTDP-4-dehydrorhamnose reductase-like protein, at 654,918 to 655,751
_633
HP15_634: HP15_634 - transcriptional regulator, Crp/Fnr family, at 655,779 to 656,528
_634
HP15_635: HP15_635 - 3-oxoacyl-(acyl carrier protein) synthase I, at 656,668 to 657,852
_635
HP15_636: HP15_636 - GTP-binding protein, ribosome biogenesis, YlqF, at 658,013 to 658,951
_636
Position (kb) 656
657
658 Strain fitness (log2 ratio) -1
0
1
2 at 655.959 kb on - strand, within HP15_634 at 656.069 kb on + strand, within HP15_634 at 656.240 kb on - strand, within HP15_634 at 656.271 kb on + strand, within HP15_634 at 656.399 kb on + strand, within HP15_634 at 656.658 kb on - strand at 656.658 kb on - strand at 656.658 kb on - strand at 656.868 kb on - strand, within HP15_635 at 656.870 kb on - strand, within HP15_635 at 657.011 kb on + strand, within HP15_635 at 657.019 kb on - strand, within HP15_635 at 657.039 kb on + strand, within HP15_635 at 657.039 kb on + strand, within HP15_635 at 657.047 kb on - strand, within HP15_635 at 657.052 kb on - strand, within HP15_635 at 657.089 kb on - strand, within HP15_635 at 657.089 kb on - strand, within HP15_635 at 657.345 kb on - strand, within HP15_635 at 657.350 kb on + strand, within HP15_635 at 657.454 kb on + strand, within HP15_635 at 657.513 kb on - strand, within HP15_635 at 657.513 kb on - strand, within HP15_635 at 657.682 kb on - strand, within HP15_635 at 658.019 kb on - strand at 658.126 kb on + strand, within HP15_636 at 658.134 kb on - strand, within HP15_636 at 658.134 kb on - strand, within HP15_636
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 655,959 - HP15_634 0.24 +0.4 656,069 + HP15_634 0.39 -0.2 656,240 - HP15_634 0.61 +0.3 656,271 + HP15_634 0.66 +0.3 656,399 + HP15_634 0.83 -0.2 656,658 - -0.0 656,658 - +0.5 656,658 - +0.2 656,868 - HP15_635 0.17 +0.0 656,870 - HP15_635 0.17 +1.3 657,011 + HP15_635 0.29 +0.9 657,019 - HP15_635 0.30 +0.8 657,039 + HP15_635 0.31 +1.4 657,039 + HP15_635 0.31 +0.3 657,047 - HP15_635 0.32 +0.0 657,052 - HP15_635 0.32 +0.3 657,089 - HP15_635 0.36 +0.7 657,089 - HP15_635 0.36 +0.3 657,345 - HP15_635 0.57 +0.5 657,350 + HP15_635 0.58 +1.9 657,454 + HP15_635 0.66 +0.5 657,513 - HP15_635 0.71 +1.0 657,513 - HP15_635 0.71 +1.6 657,682 - HP15_635 0.86 +0.1 658,019 - +0.8 658,126 + HP15_636 0.12 -0.1 658,134 - HP15_636 0.13 -0.2 658,134 - HP15_636 0.13 -0.1
Or see this region's nucleotide sequence