Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2750 and HP15_2751 are separated by 9 nucleotides HP15_2751 and HP15_2752 are separated by 52 nucleotides
HP15_2750: HP15_2750 - protein containing carbamoyl phosphate synthetase, large subunit, ATP-binding / carboxyl transferase / carbamoyl phosphate synthase, large subunit, N-terminal / biotin carboxylase, C-terminal / biotin/lipoyl attachment, at 2,901,054 to 2,904,329
_2750
HP15_2751: HP15_2751 - conserved hypothetical protein, secreted, at 2,904,339 to 2,906,039
_2751
HP15_2752: HP15_2752 - glutathione-regulated potassium-efflux system protein kefC, at 2,906,092 to 2,907,975
_2752
Position (kb)
2904
2905
2906
2907 Strain fitness (log2 ratio)
-1
0
1 at 2903.394 kb on - strand, within HP15_2750 at 2903.424 kb on - strand, within HP15_2750 at 2903.439 kb on - strand, within HP15_2750 at 2903.465 kb on + strand, within HP15_2750 at 2903.551 kb on + strand, within HP15_2750 at 2903.655 kb on + strand, within HP15_2750 at 2903.663 kb on - strand, within HP15_2750 at 2903.668 kb on - strand, within HP15_2750 at 2903.705 kb on - strand, within HP15_2750 at 2903.803 kb on - strand, within HP15_2750 at 2903.855 kb on + strand, within HP15_2750 at 2903.861 kb on - strand, within HP15_2750 at 2903.863 kb on - strand, within HP15_2750 at 2903.964 kb on + strand, within HP15_2750 at 2903.989 kb on - strand, within HP15_2750 at 2903.997 kb on + strand, within HP15_2750 at 2904.010 kb on - strand at 2904.062 kb on + strand at 2904.093 kb on + strand at 2904.183 kb on - strand at 2904.185 kb on + strand at 2904.193 kb on - strand at 2904.193 kb on - strand at 2904.244 kb on + strand at 2904.488 kb on - strand at 2904.495 kb on + strand at 2904.528 kb on + strand, within HP15_2751 at 2904.572 kb on + strand, within HP15_2751 at 2904.613 kb on + strand, within HP15_2751 at 2904.613 kb on + strand, within HP15_2751 at 2904.613 kb on - strand, within HP15_2751 at 2904.636 kb on - strand, within HP15_2751 at 2904.681 kb on + strand, within HP15_2751 at 2904.755 kb on + strand, within HP15_2751 at 2904.891 kb on + strand, within HP15_2751 at 2904.989 kb on - strand, within HP15_2751 at 2905.017 kb on + strand, within HP15_2751 at 2905.076 kb on - strand, within HP15_2751 at 2905.334 kb on - strand, within HP15_2751 at 2905.452 kb on + strand, within HP15_2751 at 2905.551 kb on + strand, within HP15_2751 at 2905.556 kb on + strand, within HP15_2751 at 2905.598 kb on + strand, within HP15_2751 at 2905.604 kb on + strand, within HP15_2751 at 2905.651 kb on + strand, within HP15_2751 at 2905.762 kb on + strand, within HP15_2751 at 2905.770 kb on - strand, within HP15_2751 at 2905.781 kb on + strand, within HP15_2751 at 2905.783 kb on + strand, within HP15_2751 at 2905.795 kb on + strand, within HP15_2751 at 2905.805 kb on + strand, within HP15_2751 at 2905.856 kb on - strand, within HP15_2751 at 2905.922 kb on + strand at 2905.930 kb on - strand at 2906.063 kb on + strand at 2906.142 kb on + strand at 2906.164 kb on + strand at 2906.167 kb on - strand at 2906.196 kb on - strand at 2906.337 kb on + strand, within HP15_2752 at 2906.393 kb on + strand, within HP15_2752 at 2906.448 kb on + strand, within HP15_2752 at 2906.493 kb on - strand, within HP15_2752 at 2906.498 kb on - strand, within HP15_2752 at 2906.498 kb on - strand, within HP15_2752 at 2906.572 kb on + strand, within HP15_2752 at 2906.782 kb on + strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.905 kb on - strand, within HP15_2752 at 2906.934 kb on + strand, within HP15_2752 at 2907.027 kb on + strand, within HP15_2752
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 2,903,394 - HP15_2750 0.71 -0.7 2,903,424 - HP15_2750 0.72 +0.2 2,903,439 - HP15_2750 0.73 +0.5 2,903,465 + HP15_2750 0.74 -0.2 2,903,551 + HP15_2750 0.76 +0.6 2,903,655 + HP15_2750 0.79 +0.5 2,903,663 - HP15_2750 0.80 +0.8 2,903,668 - HP15_2750 0.80 +0.9 2,903,705 - HP15_2750 0.81 -0.0 2,903,803 - HP15_2750 0.84 +0.3 2,903,855 + HP15_2750 0.86 +0.0 2,903,861 - HP15_2750 0.86 +0.3 2,903,863 - HP15_2750 0.86 -0.2 2,903,964 + HP15_2750 0.89 +0.9 2,903,989 - HP15_2750 0.90 -0.2 2,903,997 + HP15_2750 0.90 +0.5 2,904,010 - +0.4 2,904,062 + +0.5 2,904,093 + +0.1 2,904,183 - +0.2 2,904,185 + +0.3 2,904,193 - +0.1 2,904,193 - -0.0 2,904,244 + +0.9 2,904,488 - -0.1 2,904,495 + -0.3 2,904,528 + HP15_2751 0.11 -0.0 2,904,572 + HP15_2751 0.14 -0.1 2,904,613 + HP15_2751 0.16 +0.0 2,904,613 + HP15_2751 0.16 +0.3 2,904,613 - HP15_2751 0.16 +1.0 2,904,636 - HP15_2751 0.17 -0.2 2,904,681 + HP15_2751 0.20 -0.9 2,904,755 + HP15_2751 0.24 -0.1 2,904,891 + HP15_2751 0.32 -0.1 2,904,989 - HP15_2751 0.38 -1.7 2,905,017 + HP15_2751 0.40 +0.2 2,905,076 - HP15_2751 0.43 +0.3 2,905,334 - HP15_2751 0.58 +0.1 2,905,452 + HP15_2751 0.65 -1.4 2,905,551 + HP15_2751 0.71 -0.1 2,905,556 + HP15_2751 0.72 -0.3 2,905,598 + HP15_2751 0.74 +0.3 2,905,604 + HP15_2751 0.74 +0.5 2,905,651 + HP15_2751 0.77 -0.5 2,905,762 + HP15_2751 0.84 +0.3 2,905,770 - HP15_2751 0.84 -0.2 2,905,781 + HP15_2751 0.85 -0.6 2,905,783 + HP15_2751 0.85 +0.4 2,905,795 + HP15_2751 0.86 -0.1 2,905,805 + HP15_2751 0.86 +0.1 2,905,856 - HP15_2751 0.89 -0.0 2,905,922 + -0.7 2,905,930 - -0.3 2,906,063 + +0.3 2,906,142 + -0.1 2,906,164 + -1.4 2,906,167 - -0.7 2,906,196 - +0.3 2,906,337 + HP15_2752 0.13 +0.6 2,906,393 + HP15_2752 0.16 -0.5 2,906,448 + HP15_2752 0.19 -0.2 2,906,493 - HP15_2752 0.21 -0.1 2,906,498 - HP15_2752 0.22 +0.1 2,906,498 - HP15_2752 0.22 -0.1 2,906,572 + HP15_2752 0.25 +0.3 2,906,782 + HP15_2752 0.37 +0.3 2,906,895 - HP15_2752 0.43 -1.2 2,906,895 - HP15_2752 0.43 -0.4 2,906,895 - HP15_2752 0.43 +0.2 2,906,895 - HP15_2752 0.43 -0.1 2,906,895 - HP15_2752 0.43 +0.4 2,906,895 - HP15_2752 0.43 -0.8 2,906,895 - HP15_2752 0.43 -0.6 2,906,905 - HP15_2752 0.43 +0.8 2,906,934 + HP15_2752 0.45 +0.3 2,907,027 + HP15_2752 0.50 -1.2
Or see this region's nucleotide sequence