Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2538 and HP15_2540 are separated by 143 nucleotides HP15_2540 and HP15_2539 overlap by 21 nucleotides HP15_2539 and HP15_2541 are separated by 22 nucleotides HP15_2541 and HP15_2542 are separated by 155 nucleotides
HP15_2538: HP15_2538 - acetyl/propionyl-CoA carboxylase beta subunit, at 2,682,796 to 2,684,412
_2538
HP15_2540: HP15_2540 - hypothetical protein, at 2,684,556 to 2,684,810
_2540
HP15_2539: HP15_2539 - acyl-CoA dehydrogenase domain protein, at 2,684,790 to 2,685,950
_2539
HP15_2541: HP15_2541 - enoyl-CoA hydratase/isomerase family protein, at 2,685,973 to 2,686,794
_2541
HP15_2542: HP15_2542 - methylcrotonoyl-coenzyme A carboxylase 1 (alpha), at 2,686,950 to 2,688,920
_2542
Position (kb)
2684
2685
2686 Strain fitness (log2 ratio)
-2
-1
0
1 at 2683.862 kb on - strand, within HP15_2538 at 2683.928 kb on + strand, within HP15_2538 at 2683.959 kb on - strand, within HP15_2538 at 2684.221 kb on - strand, within HP15_2538 at 2684.222 kb on + strand, within HP15_2538 at 2684.227 kb on + strand, within HP15_2538 at 2684.271 kb on + strand at 2684.279 kb on - strand at 2684.537 kb on + strand at 2684.810 kb on - strand at 2684.978 kb on + strand, within HP15_2539 at 2684.986 kb on - strand, within HP15_2539 at 2685.067 kb on + strand, within HP15_2539 at 2685.244 kb on + strand, within HP15_2539 at 2685.389 kb on - strand, within HP15_2539 at 2685.455 kb on - strand, within HP15_2539 at 2685.518 kb on + strand, within HP15_2539 at 2685.526 kb on - strand, within HP15_2539 at 2685.526 kb on - strand, within HP15_2539 at 2685.720 kb on + strand, within HP15_2539 at 2685.720 kb on + strand, within HP15_2539 at 2685.797 kb on + strand, within HP15_2539 at 2685.872 kb on - strand at 2685.917 kb on + strand at 2685.967 kb on - strand at 2685.978 kb on - strand at 2686.099 kb on + strand, within HP15_2541 at 2686.164 kb on + strand, within HP15_2541 at 2686.164 kb on + strand, within HP15_2541 at 2686.224 kb on + strand, within HP15_2541 at 2686.251 kb on + strand, within HP15_2541 at 2686.281 kb on + strand, within HP15_2541 at 2686.300 kb on - strand, within HP15_2541 at 2686.327 kb on + strand, within HP15_2541 at 2686.335 kb on - strand, within HP15_2541 at 2686.335 kb on - strand, within HP15_2541 at 2686.491 kb on + strand, within HP15_2541 at 2686.650 kb on - strand, within HP15_2541 at 2686.652 kb on + strand, within HP15_2541 at 2686.683 kb on + strand, within HP15_2541 at 2686.749 kb on - strand at 2686.904 kb on + strand at 2686.912 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 2,683,862 - HP15_2538 0.66 +0.5 2,683,928 + HP15_2538 0.70 -0.1 2,683,959 - HP15_2538 0.72 -0.5 2,684,221 - HP15_2538 0.88 +0.4 2,684,222 + HP15_2538 0.88 -0.1 2,684,227 + HP15_2538 0.88 +0.2 2,684,271 + -0.4 2,684,279 - +0.9 2,684,537 + -0.3 2,684,810 - -0.1 2,684,978 + HP15_2539 0.16 +1.0 2,684,986 - HP15_2539 0.17 +1.0 2,685,067 + HP15_2539 0.24 +0.8 2,685,244 + HP15_2539 0.39 +0.8 2,685,389 - HP15_2539 0.52 +0.0 2,685,455 - HP15_2539 0.57 +0.3 2,685,518 + HP15_2539 0.63 +0.4 2,685,526 - HP15_2539 0.63 -0.1 2,685,526 - HP15_2539 0.63 +0.1 2,685,720 + HP15_2539 0.80 -0.0 2,685,720 + HP15_2539 0.80 +0.3 2,685,797 + HP15_2539 0.87 +0.3 2,685,872 - +0.6 2,685,917 + +0.5 2,685,967 - -0.1 2,685,978 - +0.4 2,686,099 + HP15_2541 0.15 -0.6 2,686,164 + HP15_2541 0.23 +0.6 2,686,164 + HP15_2541 0.23 -1.3 2,686,224 + HP15_2541 0.31 -0.2 2,686,251 + HP15_2541 0.34 -0.1 2,686,281 + HP15_2541 0.37 -0.6 2,686,300 - HP15_2541 0.40 +0.6 2,686,327 + HP15_2541 0.43 +0.5 2,686,335 - HP15_2541 0.44 +0.4 2,686,335 - HP15_2541 0.44 +0.2 2,686,491 + HP15_2541 0.63 -0.4 2,686,650 - HP15_2541 0.82 -2.5 2,686,652 + HP15_2541 0.83 -0.4 2,686,683 + HP15_2541 0.86 +0.4 2,686,749 - +1.0 2,686,904 + -0.1 2,686,912 - +0.2
Or see this region's nucleotide sequence