Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2422 and HP15_2423 are separated by 486 nucleotides HP15_2423 and HP15_2424 are separated by 129 nucleotides
HP15_2422: HP15_2422 - secreted protein containing DUF1302, at 2,561,686 to 2,563,536
_2422
HP15_2423: HP15_2423 - acyl-CoA thiolase, at 2,564,023 to 2,565,162
_2423
HP15_2424: HP15_2424 - AFG1-family ATPase, at 2,565,292 to 2,566,425
_2424
Position (kb)
2564
2565
2566 Strain fitness (log2 ratio)
-2
-1
0
1 at 2563.092 kb on - strand, within HP15_2422 at 2563.111 kb on + strand, within HP15_2422 at 2563.168 kb on - strand, within HP15_2422 at 2563.176 kb on + strand, within HP15_2422 at 2563.176 kb on + strand, within HP15_2422 at 2563.337 kb on + strand, within HP15_2422 at 2563.337 kb on + strand, within HP15_2422 at 2563.345 kb on - strand, within HP15_2422 at 2563.345 kb on - strand, within HP15_2422 at 2563.345 kb on - strand, within HP15_2422 at 2563.345 kb on - strand, within HP15_2422 at 2563.414 kb on - strand at 2563.414 kb on - strand at 2563.570 kb on + strand at 2563.583 kb on - strand at 2563.604 kb on - strand at 2563.613 kb on - strand at 2563.930 kb on - strand at 2563.931 kb on - strand at 2563.942 kb on - strand at 2564.052 kb on - strand at 2564.053 kb on - strand at 2564.109 kb on - strand at 2564.141 kb on - strand, within HP15_2423 at 2564.162 kb on + strand, within HP15_2423 at 2564.214 kb on + strand, within HP15_2423 at 2564.345 kb on + strand, within HP15_2423 at 2564.391 kb on - strand, within HP15_2423 at 2564.447 kb on - strand, within HP15_2423 at 2564.609 kb on + strand, within HP15_2423 at 2564.649 kb on + strand, within HP15_2423 at 2564.654 kb on - strand, within HP15_2423 at 2564.686 kb on + strand, within HP15_2423 at 2564.694 kb on - strand, within HP15_2423 at 2564.751 kb on + strand, within HP15_2423 at 2564.759 kb on - strand, within HP15_2423 at 2564.767 kb on + strand, within HP15_2423 at 2564.791 kb on + strand, within HP15_2423 at 2564.848 kb on - strand, within HP15_2423 at 2564.899 kb on - strand, within HP15_2423 at 2565.078 kb on - strand at 2565.085 kb on + strand at 2565.119 kb on - strand at 2565.134 kb on - strand at 2565.136 kb on + strand at 2565.218 kb on + strand at 2565.257 kb on + strand at 2565.265 kb on - strand at 2565.265 kb on - strand at 2565.265 kb on - strand at 2565.272 kb on + strand at 2565.301 kb on + strand at 2565.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 2,563,092 - HP15_2422 0.76 -0.2 2,563,111 + HP15_2422 0.77 -0.2 2,563,168 - HP15_2422 0.80 -0.3 2,563,176 + HP15_2422 0.80 -0.0 2,563,176 + HP15_2422 0.80 -0.3 2,563,337 + HP15_2422 0.89 -0.0 2,563,337 + HP15_2422 0.89 -0.0 2,563,345 - HP15_2422 0.90 +0.1 2,563,345 - HP15_2422 0.90 -0.2 2,563,345 - HP15_2422 0.90 +0.9 2,563,345 - HP15_2422 0.90 -0.9 2,563,414 - +0.7 2,563,414 - -0.7 2,563,570 + +0.4 2,563,583 - -0.2 2,563,604 - -0.6 2,563,613 - -0.4 2,563,930 - +0.5 2,563,931 - +0.1 2,563,942 - +0.1 2,564,052 - +0.2 2,564,053 - +0.2 2,564,109 - +0.5 2,564,141 - HP15_2423 0.10 -0.1 2,564,162 + HP15_2423 0.12 -0.7 2,564,214 + HP15_2423 0.17 +0.0 2,564,345 + HP15_2423 0.28 -0.8 2,564,391 - HP15_2423 0.32 -2.1 2,564,447 - HP15_2423 0.37 -0.8 2,564,609 + HP15_2423 0.51 -0.3 2,564,649 + HP15_2423 0.55 +0.0 2,564,654 - HP15_2423 0.55 +0.1 2,564,686 + HP15_2423 0.58 +0.1 2,564,694 - HP15_2423 0.59 -0.5 2,564,751 + HP15_2423 0.64 +0.0 2,564,759 - HP15_2423 0.65 -0.2 2,564,767 + HP15_2423 0.65 +0.0 2,564,791 + HP15_2423 0.67 +0.0 2,564,848 - HP15_2423 0.72 +0.2 2,564,899 - HP15_2423 0.77 +0.2 2,565,078 - +0.4 2,565,085 + -0.2 2,565,119 - +0.2 2,565,134 - -0.0 2,565,136 + +0.4 2,565,218 + -0.2 2,565,257 + +0.4 2,565,265 - +0.2 2,565,265 - -0.0 2,565,265 - +0.1 2,565,272 + +0.3 2,565,301 + +0.4 2,565,316 - -0.2
Or see this region's nucleotide sequence