Strain Fitness in Marinobacter adhaerens HP15 around HP15_2223
Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,341,377 | + | HP15_2222 | 0.83 | -0.3 | |
2,341,452 | - | HP15_2222 | 0.85 | -1.9 | |
2,341,453 | + | HP15_2222 | 0.85 | -0.5 | |
2,341,548 | + | HP15_2222 | 0.88 | -0.3 | |
2,341,556 | - | HP15_2222 | 0.88 | -1.6 | |
2,341,685 | - | -1.8 | |||
2,341,695 | - | -2.1 | |||
2,341,914 | + | -0.6 | |||
2,341,991 | - | HP15_2223 | 0.11 | +0.1 | |
2,342,061 | - | HP15_2223 | 0.24 | -0.5 | |
2,342,130 | + | HP15_2223 | 0.36 | -1.9 | |
2,342,200 | - | HP15_2223 | 0.49 | +0.2 | |
2,342,348 | + | HP15_2223 | 0.76 | -0.1 | |
2,342,356 | - | HP15_2223 | 0.78 | +0.6 | |
2,342,364 | - | HP15_2223 | 0.79 | -1.0 | |
2,342,477 | - | +1.1 | |||
2,342,477 | - | -1.0 | |||
2,342,530 | - | -1.3 | |||
2,342,530 | - | +0.3 | |||
2,342,530 | - | +1.0 | |||
2,342,563 | + | HP15_2224 | 0.11 | -0.2 | |
2,342,676 | - | HP15_2224 | 0.24 | +0.3 | |
2,342,896 | + | HP15_2224 | 0.50 | -0.6 | |
2,342,896 | + | HP15_2224 | 0.50 | -0.2 | |
2,342,908 | + | HP15_2224 | 0.51 | -0.2 | |
2,342,916 | - | HP15_2224 | 0.52 | -0.4 | |
2,343,389 | + | -0.6 | |||
2,343,409 | - | +0.5 | |||
2,343,463 | + | +0.5 |
Or see this region's nucleotide sequence