Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1505 and HP15_1506 are separated by 145 nucleotides HP15_1506 and HP15_tRNA29 overlap by 264 nucleotides HP15_tRNA29 and HP15_1507 are separated by 240 nucleotides HP15_1507 and HP15_1508 are separated by 50 nucleotides
HP15_1505: HP15_1505 - protein containing DUF924, bacterial, at 1,581,362 to 1,581,964
_1505
HP15_1506: HP15_1506 - secreted protein containing YkuD domain, at 1,582,110 to 1,583,147
_1506
HP15_tRNA29: HP15_tRNA29 - tRNA-Gly, at 1,582,884 to 1,582,959
_tRNA29
HP15_1507: HP15_1507 - MOSC domain protein beta barrel domain protein, at 1,583,200 to 1,583,889
_1507
HP15_1508: HP15_1508 - ABC transporter ATPase component, at 1,583,940 to 1,585,850
_1508
Position (kb)
1582
1583 Strain fitness (log2 ratio)
-1
0
1 at 1581.959 kb on + strand at 1581.959 kb on - strand at 1581.969 kb on + strand at 1582.287 kb on + strand, within HP15_1506 at 1582.295 kb on - strand, within HP15_1506 at 1582.473 kb on - strand, within HP15_1506 at 1582.480 kb on + strand, within HP15_1506 at 1582.483 kb on - strand, within HP15_1506 at 1582.483 kb on - strand, within HP15_1506 at 1582.483 kb on - strand, within HP15_1506 at 1582.656 kb on - strand, within HP15_1506 at 1582.725 kb on - strand, within HP15_1506 at 1582.746 kb on - strand, within HP15_1506 at 1583.053 kb on - strand at 1583.149 kb on - strand at 1583.369 kb on + strand, within HP15_1507 at 1583.462 kb on - strand, within HP15_1507 at 1583.462 kb on - strand, within HP15_1507 at 1583.609 kb on - strand, within HP15_1507 at 1583.641 kb on + strand, within HP15_1507 at 1583.671 kb on + strand, within HP15_1507 at 1583.711 kb on + strand, within HP15_1507 at 1583.719 kb on - strand, within HP15_1507 at 1583.779 kb on - strand, within HP15_1507 at 1583.786 kb on + strand, within HP15_1507
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 1,581,959 + +0.3 1,581,959 - -0.6 1,581,969 + -1.2 1,582,287 + HP15_1506 0.17 +0.1 1,582,295 - HP15_1506 0.18 -1.2 1,582,473 - HP15_1506 0.35 -0.3 1,582,480 + HP15_1506 0.36 +0.2 1,582,483 - HP15_1506 0.36 +0.2 1,582,483 - HP15_1506 0.36 +0.3 1,582,483 - HP15_1506 0.36 +0.2 1,582,656 - HP15_1506 0.53 +0.1 1,582,725 - HP15_1506 0.59 -0.4 1,582,746 - HP15_1506 0.61 +0.0 1,583,053 - +0.1 1,583,149 - +0.3 1,583,369 + HP15_1507 0.24 -0.4 1,583,462 - HP15_1507 0.38 +0.4 1,583,462 - HP15_1507 0.38 +0.4 1,583,609 - HP15_1507 0.59 -0.4 1,583,641 + HP15_1507 0.64 -0.0 1,583,671 + HP15_1507 0.68 +0.1 1,583,711 + HP15_1507 0.74 -0.2 1,583,719 - HP15_1507 0.75 -0.2 1,583,779 - HP15_1507 0.84 +0.4 1,583,786 + HP15_1507 0.85 +0.4
Or see this region's nucleotide sequence