Experiment: MoLS4 with Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1683 and gcvT overlap by 4 nucleotides gcvT and DVU1685 are separated by 51 nucleotides DVU1685 and DVU1686 overlap by 4 nucleotides
DVU1683: DVU1683 - hypothetical protein (TIGR), at 1,761,202 to 1,762,938
DVU1683
DVU1684: gcvT - glycine cleavage system T protein (TIGR), at 1,762,935 to 1,764,065
gcvT
DVU1685: DVU1685 - conserved hypothetical protein TIGR00046 (TIGR), at 1,764,117 to 1,764,866
DVU1685
DVU1686: DVU1686 - ATPase, AAA family (TIGR), at 1,764,863 to 1,766,098
DVU1686
Position (kb) 1762
1763
1764
1765 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1762.072 kb on - strand, within DVU1683 at 1762.180 kb on - strand, within DVU1683 at 1762.180 kb on - strand, within DVU1683 at 1762.202 kb on + strand, within DVU1683 at 1762.207 kb on + strand, within DVU1683 at 1762.210 kb on - strand, within DVU1683 at 1762.243 kb on - strand, within DVU1683 at 1762.304 kb on - strand, within DVU1683 at 1762.427 kb on - strand, within DVU1683 at 1762.588 kb on - strand, within DVU1683 at 1762.603 kb on - strand, within DVU1683 at 1762.611 kb on + strand, within DVU1683 at 1762.654 kb on + strand, within DVU1683 at 1762.671 kb on + strand, within DVU1683 at 1762.881 kb on + strand at 1762.906 kb on - strand at 1762.999 kb on + strand at 1763.120 kb on + strand, within gcvT at 1763.260 kb on - strand, within gcvT at 1763.334 kb on + strand, within gcvT at 1763.342 kb on - strand, within gcvT at 1763.381 kb on - strand, within gcvT at 1763.385 kb on + strand, within gcvT at 1763.404 kb on + strand, within gcvT at 1763.513 kb on - strand, within gcvT at 1763.588 kb on + strand, within gcvT at 1763.588 kb on + strand, within gcvT at 1763.635 kb on - strand, within gcvT at 1763.686 kb on + strand, within gcvT at 1763.719 kb on - strand, within gcvT at 1763.755 kb on - strand, within gcvT at 1763.775 kb on + strand, within gcvT at 1763.777 kb on - strand, within gcvT at 1763.790 kb on - strand, within gcvT at 1763.790 kb on - strand, within gcvT at 1763.807 kb on - strand, within gcvT at 1764.015 kb on + strand at 1764.124 kb on + strand at 1764.255 kb on + strand, within DVU1685 at 1764.331 kb on - strand, within DVU1685 at 1764.470 kb on + strand, within DVU1685 at 1764.547 kb on - strand, within DVU1685 at 1764.580 kb on - strand, within DVU1685 at 1764.809 kb on + strand at 1764.905 kb on - strand at 1764.961 kb on - strand at 1765.028 kb on - strand, within DVU1686
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Urea (N) remove 1,762,072 - DVU1683 0.50 +0.4 1,762,180 - DVU1683 0.56 -1.0 1,762,180 - DVU1683 0.56 -0.3 1,762,202 + DVU1683 0.58 -0.6 1,762,207 + DVU1683 0.58 -0.3 1,762,210 - DVU1683 0.58 +0.3 1,762,243 - DVU1683 0.60 -0.4 1,762,304 - DVU1683 0.63 +0.1 1,762,427 - DVU1683 0.71 +1.7 1,762,588 - DVU1683 0.80 -0.2 1,762,603 - DVU1683 0.81 -0.2 1,762,611 + DVU1683 0.81 -0.6 1,762,654 + DVU1683 0.84 -0.2 1,762,671 + DVU1683 0.85 -0.3 1,762,881 + -0.4 1,762,906 - +0.9 1,762,999 + -1.3 1,763,120 + gcvT DVU1684 0.16 -1.8 1,763,260 - gcvT DVU1684 0.29 -0.2 1,763,334 + gcvT DVU1684 0.35 +1.7 1,763,342 - gcvT DVU1684 0.36 -1.3 1,763,381 - gcvT DVU1684 0.39 -0.7 1,763,385 + gcvT DVU1684 0.40 -0.3 1,763,404 + gcvT DVU1684 0.41 -0.1 1,763,513 - gcvT DVU1684 0.51 -0.6 1,763,588 + gcvT DVU1684 0.58 +0.1 1,763,588 + gcvT DVU1684 0.58 -1.3 1,763,635 - gcvT DVU1684 0.62 +3.4 1,763,686 + gcvT DVU1684 0.66 -0.6 1,763,719 - gcvT DVU1684 0.69 -1.3 1,763,755 - gcvT DVU1684 0.73 -0.6 1,763,775 + gcvT DVU1684 0.74 -0.0 1,763,777 - gcvT DVU1684 0.74 -0.6 1,763,790 - gcvT DVU1684 0.76 -1.0 1,763,790 - gcvT DVU1684 0.76 -1.3 1,763,807 - gcvT DVU1684 0.77 -1.0 1,764,015 + -0.1 1,764,124 + -0.7 1,764,255 + DVU1685 0.18 -2.5 1,764,331 - DVU1685 0.29 +0.5 1,764,470 + DVU1685 0.47 -0.0 1,764,547 - DVU1685 0.57 +0.1 1,764,580 - DVU1685 0.62 -0.7 1,764,809 + -1.5 1,764,905 - -0.5 1,764,961 - +0.1 1,765,028 - DVU1686 0.13 -0.1
Or see this region's nucleotide sequence