Strain Fitness in Marinobacter adhaerens HP15 around HP15_1933
Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Polymyxin B sulfate 0.0004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,051,557 | - | HP15_1932 | 0.22 | +1.0 | |
2,052,481 | - | HP15_1933 | 0.24 | +0.4 | |
2,052,494 | + | HP15_1933 | 0.26 | -1.0 | |
2,052,584 | + | HP15_1933 | 0.39 | -0.8 | |
2,052,624 | - | HP15_1933 | 0.45 | +0.0 | |
2,052,840 | - | HP15_1933 | 0.77 | -1.3 | |
2,052,850 | - | HP15_1933 | 0.78 | +0.1 | |
2,052,962 | + | -1.0 | |||
2,052,970 | - | -0.3 | |||
2,053,193 | - | +0.2 | |||
2,053,235 | + | +0.2 | |||
2,053,314 | - | HP15_1934 | 0.13 | -0.4 | |
2,053,314 | - | HP15_1934 | 0.13 | +0.0 | |
2,053,330 | - | HP15_1934 | 0.14 | -0.2 | |
2,053,428 | + | HP15_1934 | 0.20 | +0.9 | |
2,053,492 | + | HP15_1934 | 0.24 | -0.4 | |
2,053,513 | - | HP15_1934 | 0.26 | -0.8 | |
2,053,581 | - | HP15_1934 | 0.30 | -0.2 | |
2,053,610 | - | HP15_1934 | 0.32 | +0.9 | |
2,053,610 | - | HP15_1934 | 0.32 | +0.3 | |
2,053,626 | + | HP15_1934 | 0.33 | -0.2 | |
2,053,648 | - | HP15_1934 | 0.34 | +0.5 | |
2,053,697 | + | HP15_1934 | 0.37 | -0.2 | |
2,053,769 | + | HP15_1934 | 0.42 | +0.4 | |
2,053,769 | + | HP15_1934 | 0.42 | -0.0 | |
2,053,852 | + | HP15_1934 | 0.47 | +0.3 | |
2,053,884 | + | HP15_1934 | 0.49 | -0.2 | |
2,053,892 | + | HP15_1934 | 0.49 | -0.3 |
Or see this region's nucleotide sequence