Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20775
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,341,646 | - | BWI76_RS20770 | 0.41 | -0.7 | |
4,341,693 | + | BWI76_RS20770 | 0.44 | -0.9 | |
4,341,907 | - | BWI76_RS20770 | 0.60 | +0.3 | |
4,341,988 | - | BWI76_RS20770 | 0.65 | -0.4 | |
4,342,093 | + | BWI76_RS20770 | 0.73 | -0.3 | |
4,342,241 | + | BWI76_RS20770 | 0.83 | +0.4 | |
4,342,241 | + | BWI76_RS20770 | 0.83 | +0.1 | |
4,342,249 | - | BWI76_RS20770 | 0.84 | +0.3 | |
4,342,395 | + | +0.6 | |||
4,342,395 | + | -0.6 | |||
4,342,608 | - | BWI76_RS20775 | 0.11 | +0.5 | |
4,343,138 | - | BWI76_RS20775 | 0.54 | +0.4 | |
4,343,138 | - | BWI76_RS20775 | 0.54 | +0.3 | |
4,343,335 | + | BWI76_RS20775 | 0.70 | +1.4 | |
4,343,343 | - | BWI76_RS20775 | 0.71 | +0.2 | |
4,343,551 | - | BWI76_RS20775 | 0.88 | +0.9 | |
4,343,655 | - | +0.7 | |||
4,343,675 | - | +0.5 | |||
4,343,764 | + | +0.1 | |||
4,343,826 | + | +0.2 | |||
4,343,859 | + | +0.9 | |||
4,344,162 | + | BWI76_RS20780 | 0.24 | +0.2 | |
4,344,162 | + | BWI76_RS20780 | 0.24 | -0.9 | |
4,344,170 | - | BWI76_RS20780 | 0.25 | -0.3 | |
4,344,227 | + | BWI76_RS20780 | 0.30 | +0.7 | |
4,344,306 | + | BWI76_RS20780 | 0.36 | +0.3 | |
4,344,398 | + | BWI76_RS20780 | 0.44 | +0.1 | |
4,344,467 | + | BWI76_RS20780 | 0.50 | -1.7 | |
4,344,669 | - | BWI76_RS20780 | 0.67 | +0.1 | |
4,344,669 | - | BWI76_RS20780 | 0.67 | -0.4 |
Or see this region's nucleotide sequence