Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14420 and BWI76_RS14425 are separated by 77 nucleotides BWI76_RS14425 and BWI76_RS14430 are separated by 287 nucleotides BWI76_RS14430 and BWI76_RS14435 are separated by 19 nucleotides BWI76_RS14435 and BWI76_RS14440 are separated by 2 nucleotides
BWI76_RS14420: BWI76_RS14420 - hypothetical protein, at 3,010,700 to 3,011,482
_RS14420
BWI76_RS14425: BWI76_RS14425 - hypothetical protein, at 3,011,560 to 3,011,739
_RS14425
BWI76_RS14430: BWI76_RS14430 - peptidase C45, at 3,012,027 to 3,013,049
_RS14430
BWI76_RS14435: BWI76_RS14435 - glutamine ABC transporter ATP-binding protein, at 3,013,069 to 3,013,791
_RS14435
BWI76_RS14440: BWI76_RS14440 - glutamine ABC transporter permease GlnP, at 3,013,794 to 3,014,450
_RS14440
Position (kb)
3012
3013
3014 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3011.031 kb on - strand, within BWI76_RS14420 at 3011.036 kb on - strand, within BWI76_RS14420 at 3011.038 kb on - strand, within BWI76_RS14420 at 3011.048 kb on - strand, within BWI76_RS14420 at 3011.053 kb on - strand, within BWI76_RS14420 at 3011.077 kb on - strand, within BWI76_RS14420 at 3011.149 kb on + strand, within BWI76_RS14420 at 3011.172 kb on + strand, within BWI76_RS14420 at 3011.180 kb on - strand, within BWI76_RS14420 at 3011.180 kb on - strand, within BWI76_RS14420 at 3011.180 kb on - strand, within BWI76_RS14420 at 3011.270 kb on + strand, within BWI76_RS14420 at 3011.278 kb on - strand, within BWI76_RS14420 at 3011.289 kb on - strand, within BWI76_RS14420 at 3011.294 kb on - strand, within BWI76_RS14420 at 3011.398 kb on - strand, within BWI76_RS14420 at 3011.691 kb on - strand, within BWI76_RS14425 at 3011.703 kb on - strand, within BWI76_RS14425 at 3011.729 kb on - strand at 3011.754 kb on - strand at 3011.762 kb on - strand at 3011.775 kb on + strand at 3011.781 kb on - strand at 3011.852 kb on + strand at 3011.860 kb on - strand at 3011.873 kb on + strand at 3011.876 kb on - strand at 3011.898 kb on + strand at 3011.898 kb on + strand at 3011.898 kb on + strand at 3011.898 kb on + strand at 3011.928 kb on - strand at 3011.966 kb on + strand at 3011.979 kb on - strand at 3011.990 kb on + strand at 3011.990 kb on + strand at 3011.990 kb on + strand at 3011.998 kb on - strand at 3012.116 kb on - strand at 3012.239 kb on - strand, within BWI76_RS14430 at 3012.280 kb on - strand, within BWI76_RS14430 at 3012.362 kb on + strand, within BWI76_RS14430 at 3012.372 kb on + strand, within BWI76_RS14430 at 3012.380 kb on - strand, within BWI76_RS14430 at 3012.386 kb on + strand, within BWI76_RS14430 at 3012.420 kb on + strand, within BWI76_RS14430 at 3012.659 kb on + strand, within BWI76_RS14430 at 3013.010 kb on - strand at 3013.134 kb on - strand at 3013.181 kb on - strand, within BWI76_RS14435 at 3013.705 kb on - strand, within BWI76_RS14435 at 3013.746 kb on - strand at 3013.847 kb on + strand at 3013.849 kb on - strand at 3013.879 kb on + strand, within BWI76_RS14440 at 3013.879 kb on + strand, within BWI76_RS14440 at 3013.882 kb on - strand, within BWI76_RS14440 at 3013.882 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.894 kb on - strand, within BWI76_RS14440 at 3013.962 kb on - strand, within BWI76_RS14440 at 3013.967 kb on - strand, within BWI76_RS14440 at 3013.981 kb on - strand, within BWI76_RS14440 at 3014.019 kb on + strand, within BWI76_RS14440 at 3014.019 kb on + strand, within BWI76_RS14440 at 3014.019 kb on + strand, within BWI76_RS14440 at 3014.041 kb on - strand, within BWI76_RS14440 at 3014.046 kb on + strand, within BWI76_RS14440
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,011,031 - BWI76_RS14420 0.42 +2.1 3,011,036 - BWI76_RS14420 0.43 -0.6 3,011,038 - BWI76_RS14420 0.43 -0.4 3,011,048 - BWI76_RS14420 0.44 -1.0 3,011,053 - BWI76_RS14420 0.45 -0.0 3,011,077 - BWI76_RS14420 0.48 +1.0 3,011,149 + BWI76_RS14420 0.57 -0.3 3,011,172 + BWI76_RS14420 0.60 +1.8 3,011,180 - BWI76_RS14420 0.61 +0.3 3,011,180 - BWI76_RS14420 0.61 +0.4 3,011,180 - BWI76_RS14420 0.61 -0.8 3,011,270 + BWI76_RS14420 0.73 -0.5 3,011,278 - BWI76_RS14420 0.74 -1.1 3,011,289 - BWI76_RS14420 0.75 +0.3 3,011,294 - BWI76_RS14420 0.76 +0.2 3,011,398 - BWI76_RS14420 0.89 +1.8 3,011,691 - BWI76_RS14425 0.73 +1.5 3,011,703 - BWI76_RS14425 0.79 +2.4 3,011,729 - -1.2 3,011,754 - -0.5 3,011,762 - +1.2 3,011,775 + -0.4 3,011,781 - +0.3 3,011,852 + +0.2 3,011,860 - +1.8 3,011,873 + +2.8 3,011,876 - -1.8 3,011,898 + +1.0 3,011,898 + -0.8 3,011,898 + +1.0 3,011,898 + +0.4 3,011,928 - -0.7 3,011,966 + -0.8 3,011,979 - -1.4 3,011,990 + -0.8 3,011,990 + +0.8 3,011,990 + +0.5 3,011,998 - +0.0 3,012,116 - +1.0 3,012,239 - BWI76_RS14430 0.21 +0.8 3,012,280 - BWI76_RS14430 0.25 +0.4 3,012,362 + BWI76_RS14430 0.33 +0.5 3,012,372 + BWI76_RS14430 0.34 +0.8 3,012,380 - BWI76_RS14430 0.35 +0.1 3,012,386 + BWI76_RS14430 0.35 +0.5 3,012,420 + BWI76_RS14430 0.38 -0.1 3,012,659 + BWI76_RS14430 0.62 +0.8 3,013,010 - -0.6 3,013,134 - -0.4 3,013,181 - BWI76_RS14435 0.15 +0.2 3,013,705 - BWI76_RS14435 0.88 +0.8 3,013,746 - +0.6 3,013,847 + +0.8 3,013,849 - -0.1 3,013,879 + BWI76_RS14440 0.13 -1.7 3,013,879 + BWI76_RS14440 0.13 +0.9 3,013,882 - BWI76_RS14440 0.13 -0.2 3,013,882 - BWI76_RS14440 0.13 -0.8 3,013,887 - BWI76_RS14440 0.14 +0.5 3,013,887 - BWI76_RS14440 0.14 -0.7 3,013,887 - BWI76_RS14440 0.14 -0.6 3,013,887 - BWI76_RS14440 0.14 -0.2 3,013,894 - BWI76_RS14440 0.15 +0.1 3,013,962 - BWI76_RS14440 0.26 +1.6 3,013,967 - BWI76_RS14440 0.26 -0.2 3,013,981 - BWI76_RS14440 0.28 -0.7 3,014,019 + BWI76_RS14440 0.34 +0.8 3,014,019 + BWI76_RS14440 0.34 -1.2 3,014,019 + BWI76_RS14440 0.34 +0.2 3,014,041 - BWI76_RS14440 0.38 +0.5 3,014,046 + BWI76_RS14440 0.38 -0.2
Or see this region's nucleotide sequence