Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13865 and BWI76_RS13870 are separated by 203 nucleotides BWI76_RS13870 and BWI76_RS13875 are separated by 189 nucleotides
BWI76_RS13865: BWI76_RS13865 - cation diffusion facilitator family transporter, at 2,891,410 to 2,892,318
_RS13865
BWI76_RS13870: BWI76_RS13870 - hypothetical protein, at 2,892,522 to 2,893,439
_RS13870
BWI76_RS13875: BWI76_RS13875 - CbbBc protein, at 2,893,629 to 2,895,929
_RS13875
Position (kb)
2892
2893
2894 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2891.627 kb on - strand, within BWI76_RS13865 at 2891.628 kb on - strand, within BWI76_RS13865 at 2891.637 kb on + strand, within BWI76_RS13865 at 2891.645 kb on - strand, within BWI76_RS13865 at 2891.653 kb on - strand, within BWI76_RS13865 at 2891.701 kb on - strand, within BWI76_RS13865 at 2891.723 kb on - strand, within BWI76_RS13865 at 2891.783 kb on + strand, within BWI76_RS13865 at 2891.858 kb on + strand, within BWI76_RS13865 at 2892.000 kb on - strand, within BWI76_RS13865 at 2892.004 kb on - strand, within BWI76_RS13865 at 2892.015 kb on - strand, within BWI76_RS13865 at 2892.015 kb on - strand, within BWI76_RS13865 at 2892.058 kb on - strand, within BWI76_RS13865 at 2892.115 kb on - strand, within BWI76_RS13865 at 2892.115 kb on - strand, within BWI76_RS13865 at 2892.171 kb on + strand, within BWI76_RS13865 at 2892.220 kb on - strand, within BWI76_RS13865 at 2892.220 kb on - strand at 2892.220 kb on - strand, within BWI76_RS13865 at 2892.341 kb on - strand at 2892.428 kb on + strand at 2892.527 kb on + strand at 2892.532 kb on + strand at 2892.537 kb on + strand at 2892.537 kb on + strand at 2892.537 kb on + strand at 2892.537 kb on + strand at 2892.537 kb on + strand at 2892.537 kb on + strand at 2892.537 kb on + strand at 2892.545 kb on - strand at 2892.574 kb on + strand at 2892.574 kb on + strand at 2892.574 kb on + strand at 2892.574 kb on + strand at 2892.574 kb on + strand at 2892.574 kb on + strand at 2892.574 kb on + strand at 2892.574 kb on + strand at 2892.582 kb on - strand at 2892.582 kb on - strand at 2892.643 kb on + strand, within BWI76_RS13870 at 2892.667 kb on + strand, within BWI76_RS13870 at 2892.734 kb on + strand, within BWI76_RS13870 at 2892.913 kb on + strand, within BWI76_RS13870 at 2893.156 kb on + strand, within BWI76_RS13870 at 2893.192 kb on - strand, within BWI76_RS13870 at 2893.354 kb on - strand at 2893.496 kb on + strand at 2893.505 kb on + strand at 2893.584 kb on + strand at 2893.867 kb on + strand, within BWI76_RS13875 at 2894.211 kb on - strand, within BWI76_RS13875
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,891,627 - BWI76_RS13865 0.24 -2.7 2,891,628 - BWI76_RS13865 0.24 -0.9 2,891,637 + BWI76_RS13865 0.25 +0.2 2,891,645 - BWI76_RS13865 0.26 -0.8 2,891,653 - BWI76_RS13865 0.27 +1.3 2,891,701 - BWI76_RS13865 0.32 -0.1 2,891,723 - BWI76_RS13865 0.34 +0.3 2,891,783 + BWI76_RS13865 0.41 +0.4 2,891,858 + BWI76_RS13865 0.49 -0.1 2,892,000 - BWI76_RS13865 0.65 -0.3 2,892,004 - BWI76_RS13865 0.65 +0.4 2,892,015 - BWI76_RS13865 0.67 -0.2 2,892,015 - BWI76_RS13865 0.67 +0.3 2,892,058 - BWI76_RS13865 0.71 +0.6 2,892,115 - BWI76_RS13865 0.78 -2.1 2,892,115 - BWI76_RS13865 0.78 +0.2 2,892,171 + BWI76_RS13865 0.84 -0.5 2,892,220 - BWI76_RS13865 0.89 -0.1 2,892,220 - -1.2 2,892,220 - BWI76_RS13865 0.89 -1.4 2,892,341 - -0.7 2,892,428 + -0.2 2,892,527 + -0.6 2,892,532 + +0.1 2,892,537 + +0.2 2,892,537 + +0.2 2,892,537 + -0.0 2,892,537 + -0.4 2,892,537 + +0.4 2,892,537 + +1.1 2,892,537 + +1.8 2,892,545 - +0.6 2,892,574 + +0.0 2,892,574 + +1.1 2,892,574 + +0.1 2,892,574 + -1.3 2,892,574 + +1.0 2,892,574 + +0.1 2,892,574 + +0.1 2,892,574 + -1.3 2,892,582 - +1.2 2,892,582 - +0.8 2,892,643 + BWI76_RS13870 0.13 -0.9 2,892,667 + BWI76_RS13870 0.16 -0.8 2,892,734 + BWI76_RS13870 0.23 -1.0 2,892,913 + BWI76_RS13870 0.43 -0.5 2,893,156 + BWI76_RS13870 0.69 -0.8 2,893,192 - BWI76_RS13870 0.73 -0.2 2,893,354 - +0.1 2,893,496 + -0.1 2,893,505 + +0.1 2,893,584 + -0.1 2,893,867 + BWI76_RS13875 0.10 +0.2 2,894,211 - BWI76_RS13875 0.25 -0.3
Or see this region's nucleotide sequence