Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09615 and BWI76_RS09620 are separated by 138 nucleotides BWI76_RS09620 and BWI76_RS09625 overlap by 73 nucleotides BWI76_RS09625 and BWI76_RS09630 are separated by 0 nucleotides BWI76_RS09630 and BWI76_RS09635 are separated by 38 nucleotides
BWI76_RS09615: BWI76_RS09615 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 2,011,511 to 2,013,793
_RS09615
BWI76_RS09620: BWI76_RS09620 - translation initiation factor IF-1, at 2,013,932 to 2,014,150
_RS09620
BWI76_RS09625: BWI76_RS09625 - hypothetical protein, at 2,014,078 to 2,014,429
_RS09625
BWI76_RS09630: BWI76_RS09630 - leucyl/phenylalanyl-tRNA--protein transferase, at 2,014,430 to 2,015,134
_RS09630
BWI76_RS09635: BWI76_RS09635 - amino acid ABC transporter ATP-binding protein, at 2,015,173 to 2,016,894
_RS09635
Position (kb) 2014
2015 Strain fitness (log2 ratio) -1
0
1 at 2013.343 kb on + strand, within BWI76_RS09615 at 2013.483 kb on - strand, within BWI76_RS09615 at 2014.300 kb on + strand, within BWI76_RS09625 at 2014.875 kb on - strand, within BWI76_RS09630 at 2014.886 kb on - strand, within BWI76_RS09630 at 2015.107 kb on + strand at 2015.184 kb on + strand at 2015.192 kb on - strand at 2015.306 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,013,343 + BWI76_RS09615 0.80 +0.9 2,013,483 - BWI76_RS09615 0.86 -1.7 2,014,300 + BWI76_RS09625 0.63 -1.1 2,014,875 - BWI76_RS09630 0.63 +0.4 2,014,886 - BWI76_RS09630 0.65 +0.3 2,015,107 + -0.2 2,015,184 + +1.0 2,015,192 - -0.7 2,015,306 - -1.6
Or see this region's nucleotide sequence