Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03665

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS03660 and BWI76_RS03665 overlap by 4 nucleotidesBWI76_RS03665 and BWI76_RS03670 are separated by 81 nucleotides BWI76_RS03660: BWI76_RS03660 - hypothetical protein, at 754,892 to 756,757 _RS03660 BWI76_RS03665: BWI76_RS03665 - ABC transporter ATP-binding protein, at 756,754 to 758,490 _RS03665 BWI76_RS03670: BWI76_RS03670 - type I restriction-modification system subunit R, at 758,572 to 761,832 _RS03670 Position (kb) 756 757 758 759Strain fitness (log2 ratio) -2 -1 0 1 2 3at 756.027 kb on + strand, within BWI76_RS03660at 756.084 kb on + strand, within BWI76_RS03660at 756.159 kb on + strand, within BWI76_RS03660at 756.299 kb on + strand, within BWI76_RS03660at 756.337 kb on + strand, within BWI76_RS03660at 756.337 kb on + strand, within BWI76_RS03660at 756.863 kb on - strandat 757.161 kb on + strand, within BWI76_RS03665at 757.992 kb on + strand, within BWI76_RS03665at 758.052 kb on + strandat 758.170 kb on - strandat 758.237 kb on - strand, within BWI76_RS03665at 758.307 kb on + strand, within BWI76_RS03665at 758.320 kb on - strandat 758.351 kb on - strandat 758.407 kb on - strandat 758.525 kb on - strandat 758.587 kb on - strandat 758.587 kb on - strandat 758.587 kb on - strandat 758.600 kb on - strandat 758.606 kb on + strandat 758.610 kb on + strandat 758.610 kb on + strandat 758.621 kb on + strandat 758.621 kb on + strandat 758.621 kb on + strandat 758.621 kb on + strandat 758.621 kb on + strandat 758.621 kb on + strandat 758.623 kb on + strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.629 kb on - strandat 758.631 kb on - strandat 758.631 kb on - strandat 758.653 kb on + strandat 758.653 kb on + strandat 758.661 kb on - strandat 758.680 kb on - strandat 758.680 kb on - strandat 758.681 kb on + strandat 758.682 kb on + strandat 758.687 kb on + strandat 758.690 kb on - strandat 758.690 kb on - strandat 758.706 kb on - strandat 758.707 kb on - strandat 758.722 kb on - strandat 758.722 kb on - strandat 758.722 kb on - strandat 758.722 kb on - strandat 758.732 kb on - strandat 758.733 kb on + strandat 758.733 kb on + strandat 758.742 kb on - strandat 758.743 kb on + strandat 758.749 kb on - strandat 758.751 kb on - strandat 758.756 kb on + strandat 758.756 kb on + strandat 758.756 kb on + strandat 758.756 kb on + strandat 758.756 kb on + strandat 758.756 kb on + strandat 758.764 kb on - strandat 758.764 kb on - strandat 758.764 kb on - strandat 758.793 kb on + strandat 758.793 kb on + strandat 758.801 kb on - strandat 758.922 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.951 kb on + strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.959 kb on - strand, within BWI76_RS03670at 758.961 kb on - strand, within BWI76_RS03670at 758.961 kb on - strand, within BWI76_RS03670at 758.969 kb on - strand, within BWI76_RS03670at 759.018 kb on + strand, within BWI76_RS03670at 759.018 kb on + strand, within BWI76_RS03670at 759.019 kb on + strand, within BWI76_RS03670at 759.025 kb on - strand, within BWI76_RS03670at 759.026 kb on - strand, within BWI76_RS03670at 759.026 kb on - strand, within BWI76_RS03670at 759.026 kb on - strand, within BWI76_RS03670at 759.027 kb on - strand, within BWI76_RS03670at 759.034 kb on - strand, within BWI76_RS03670at 759.034 kb on - strand, within BWI76_RS03670at 759.036 kb on + strand, within BWI76_RS03670at 759.052 kb on + strand, within BWI76_RS03670at 759.055 kb on + strand, within BWI76_RS03670at 759.066 kb on - strand, within BWI76_RS03670at 759.108 kb on + strand, within BWI76_RS03670at 759.115 kb on - strand, within BWI76_RS03670at 759.131 kb on + strand, within BWI76_RS03670at 759.141 kb on - strand, within BWI76_RS03670at 759.192 kb on + strand, within BWI76_RS03670at 759.241 kb on + strand, within BWI76_RS03670at 759.242 kb on + strand, within BWI76_RS03670at 759.242 kb on + strand, within BWI76_RS03670at 759.242 kb on + strand, within BWI76_RS03670at 759.242 kb on + strand, within BWI76_RS03670at 759.242 kb on + strand, within BWI76_RS03670at 759.250 kb on - strand, within BWI76_RS03670at 759.250 kb on - strand, within BWI76_RS03670at 759.266 kb on - strand, within BWI76_RS03670at 759.282 kb on + strandat 759.282 kb on + strand, within BWI76_RS03670at 759.285 kb on - strand, within BWI76_RS03670at 759.290 kb on - strand, within BWI76_RS03670at 759.291 kb on + strand, within BWI76_RS03670at 759.299 kb on - strand, within BWI76_RS03670at 759.299 kb on - strand, within BWI76_RS03670at 759.335 kb on + strand, within BWI76_RS03670at 759.335 kb on + strand, within BWI76_RS03670at 759.343 kb on - strand, within BWI76_RS03670at 759.343 kb on - strand, within BWI76_RS03670at 759.359 kb on + strand, within BWI76_RS03670at 759.359 kb on + strand, within BWI76_RS03670at 759.359 kb on + strand, within BWI76_RS03670at 759.375 kb on - strand, within BWI76_RS03670at 759.458 kb on - strand, within BWI76_RS03670

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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756,027 + BWI76_RS03660 0.61 -0.3
756,084 + BWI76_RS03660 0.64 +1.0
756,159 + BWI76_RS03660 0.68 -1.2
756,299 + BWI76_RS03660 0.75 -1.2
756,337 + BWI76_RS03660 0.77 +1.0
756,337 + BWI76_RS03660 0.77 +0.5
756,863 - +0.7
757,161 + BWI76_RS03665 0.23 -0.6
757,992 + BWI76_RS03665 0.71 -1.2
758,052 + +1.0
758,170 - +2.0
758,237 - BWI76_RS03665 0.85 -2.1
758,307 + BWI76_RS03665 0.89 -0.0
758,320 - -1.5
758,351 - +0.4
758,407 - +1.0
758,525 - -0.6
758,587 - -1.1
758,587 - -0.1
758,587 - -1.1
758,600 - +0.1
758,606 + -0.0
758,610 + -1.0
758,610 + -0.6
758,621 + +1.0
758,621 + -0.4
758,621 + +0.7
758,621 + -0.6
758,621 + -0.4
758,621 + -0.0
758,623 + -0.8
758,629 - +0.3
758,629 - +0.0
758,629 - +0.6
758,629 - -0.7
758,629 - -0.0
758,629 - -1.1
758,629 - +0.6
758,629 - +0.1
758,629 - -0.6
758,629 - +0.6
758,629 - -0.6
758,629 - +0.4
758,629 - -0.3
758,631 - -0.7
758,631 - -2.4
758,653 + +0.4
758,653 + -0.4
758,661 - +1.4
758,680 - +0.2
758,680 - +0.2
758,681 + -0.0
758,682 + +1.0
758,687 + +0.1
758,690 - +0.2
758,690 - +0.6
758,706 - +1.2
758,707 - -2.0
758,722 - +0.3
758,722 - -0.7
758,722 - -0.1
758,722 - -0.2
758,732 - -0.7
758,733 + +0.5
758,733 + -1.0
758,742 - -0.1
758,743 + +0.4
758,749 - -0.3
758,751 - -0.6
758,756 + +2.2
758,756 + -1.0
758,756 + -0.3
758,756 + +1.8
758,756 + -1.2
758,756 + -1.0
758,764 - -1.1
758,764 - +0.4
758,764 - +0.2
758,793 + +1.3
758,793 + -0.5
758,801 - +0.8
758,922 + BWI76_RS03670 0.11 +0.4
758,951 + BWI76_RS03670 0.12 -0.0
758,951 + BWI76_RS03670 0.12 +0.1
758,951 + BWI76_RS03670 0.12 +3.0
758,951 + BWI76_RS03670 0.12 +0.1
758,951 + BWI76_RS03670 0.12 -1.4
758,951 + BWI76_RS03670 0.12 +0.4
758,951 + BWI76_RS03670 0.12 -0.0
758,951 + BWI76_RS03670 0.12 -0.5
758,951 + BWI76_RS03670 0.12 -0.4
758,951 + BWI76_RS03670 0.12 +0.3
758,951 + BWI76_RS03670 0.12 +1.3
758,951 + BWI76_RS03670 0.12 -1.5
758,951 + BWI76_RS03670 0.12 +1.2
758,959 - BWI76_RS03670 0.12 -0.3
758,959 - BWI76_RS03670 0.12 +0.4
758,959 - BWI76_RS03670 0.12 -0.8
758,959 - BWI76_RS03670 0.12 +1.0
758,959 - BWI76_RS03670 0.12 +0.1
758,959 - BWI76_RS03670 0.12 -1.1
758,959 - BWI76_RS03670 0.12 +0.2
758,959 - BWI76_RS03670 0.12 -1.1
758,959 - BWI76_RS03670 0.12 +0.1
758,959 - BWI76_RS03670 0.12 -0.3
758,959 - BWI76_RS03670 0.12 -0.9
758,959 - BWI76_RS03670 0.12 +0.6
758,959 - BWI76_RS03670 0.12 +0.9
758,959 - BWI76_RS03670 0.12 +1.2
758,961 - BWI76_RS03670 0.12 +2.1
758,961 - BWI76_RS03670 0.12 -0.3
758,969 - BWI76_RS03670 0.12 -0.3
759,018 + BWI76_RS03670 0.14 -0.1
759,018 + BWI76_RS03670 0.14 +0.4
759,019 + BWI76_RS03670 0.14 +0.8
759,025 - BWI76_RS03670 0.14 -0.5
759,026 - BWI76_RS03670 0.14 -1.4
759,026 - BWI76_RS03670 0.14 +0.2
759,026 - BWI76_RS03670 0.14 +0.3
759,027 - BWI76_RS03670 0.14 +1.2
759,034 - BWI76_RS03670 0.14 +0.2
759,034 - BWI76_RS03670 0.14 -0.7
759,036 + BWI76_RS03670 0.14 +0.7
759,052 + BWI76_RS03670 0.15 -0.1
759,055 + BWI76_RS03670 0.15 -0.3
759,066 - BWI76_RS03670 0.15 -0.6
759,108 + BWI76_RS03670 0.16 +0.3
759,115 - BWI76_RS03670 0.17 +0.5
759,131 + BWI76_RS03670 0.17 -0.4
759,141 - BWI76_RS03670 0.17 +0.0
759,192 + BWI76_RS03670 0.19 -0.4
759,241 + BWI76_RS03670 0.21 +0.1
759,242 + BWI76_RS03670 0.21 +0.4
759,242 + BWI76_RS03670 0.21 +2.2
759,242 + BWI76_RS03670 0.21 -0.3
759,242 + BWI76_RS03670 0.21 -0.1
759,242 + BWI76_RS03670 0.21 -0.0
759,250 - BWI76_RS03670 0.21 +0.1
759,250 - BWI76_RS03670 0.21 -0.0
759,266 - BWI76_RS03670 0.21 +0.4
759,282 + +0.6
759,282 + BWI76_RS03670 0.22 -0.3
759,285 - BWI76_RS03670 0.22 +1.0
759,290 - BWI76_RS03670 0.22 -0.1
759,291 + BWI76_RS03670 0.22 +1.8
759,299 - BWI76_RS03670 0.22 -0.1
759,299 - BWI76_RS03670 0.22 -0.3
759,335 + BWI76_RS03670 0.23 +0.0
759,335 + BWI76_RS03670 0.23 -0.1
759,343 - BWI76_RS03670 0.24 -1.2
759,343 - BWI76_RS03670 0.24 +0.6
759,359 + BWI76_RS03670 0.24 +0.2
759,359 + BWI76_RS03670 0.24 -0.5
759,359 + BWI76_RS03670 0.24 -0.1
759,375 - BWI76_RS03670 0.25 +0.4
759,458 - BWI76_RS03670 0.27 -0.6

Or see this region's nucleotide sequence