Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVUA0007

Experiment: MoLS4 with Urea (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 with Urea (N)
8,000	-	mgtE	DVUA0006	0.55	-0.5
8,071	+	mgtE	DVUA0006	0.62	+0.3
8,072	-	mgtE	DVUA0006	0.62	+0.1
8,152	+	mgtE	DVUA0006	0.70	+0.9
8,160	-	mgtE	DVUA0006	0.71	-1.7
8,251	-	mgtE	DVUA0006	0.80	+1.2
8,404	-				+0.9
8,643	-				-0.8
8,695	+				-0.3
8,741	+				+0.2
8,762	+				+0.9
8,785	+				-0.2
8,841	+				-0.1
8,849	-				-1.2
8,931	-				-3.8
8,931	-				-0.7
8,933	-				-3.4
9,042	-				-3.0
9,042	-				-0.1
9,104	+	nifB	DVUA0007	0.13	+1.2
9,124	-	nifB	DVUA0007	0.14	-2.0
9,142	-	nifB	DVUA0007	0.16	-4.2
9,178	-	nifB	DVUA0007	0.18	-4.2
9,261	-	nifB	DVUA0007	0.23	-0.3
9,313	+	nifB	DVUA0007	0.27	-5.1
9,330	+	nifB	DVUA0007	0.28	-1.8
9,338	-	nifB	DVUA0007	0.28	-3.3
9,340	-	nifB	DVUA0007	0.28	-3.5
9,340	-	nifB	DVUA0007	0.28	-4.1
9,363	-	nifB	DVUA0007	0.30	-3.8
9,448	+	nifB	DVUA0007	0.35	-4.3
9,521	-	nifB	DVUA0007	0.40	-2.4
9,548	-	nifB	DVUA0007	0.42	-4.2
9,561	-	nifB	DVUA0007	0.43	-3.5
9,612	-	nifB	DVUA0007	0.46	-3.8
9,633	+	nifB	DVUA0007	0.47	-3.8
9,641	+	nifB	DVUA0007	0.48	-3.4
9,663	-	nifB	DVUA0007	0.49	-4.5
9,669	+	nifB	DVUA0007	0.50	-1.8
9,674	+	nifB	DVUA0007	0.50	-2.5
9,698	+	nifB	DVUA0007	0.52	-0.1
9,698	+	nifB	DVUA0007	0.52	-4.0
9,706	-	nifB	DVUA0007	0.52	-2.3
9,737	-	nifB	DVUA0007	0.54	-2.3
9,744	-	nifB	DVUA0007	0.55	-3.1
9,795	-	nifB	DVUA0007	0.58	-4.1
9,814	+	nifB	DVUA0007	0.59	-3.7
9,871	+	nifB	DVUA0007	0.63	-0.5
9,879	-	nifB	DVUA0007	0.63	-4.3
9,879	-	nifB	DVUA0007	0.63	-2.6
9,991	+	nifB	DVUA0007	0.71	-3.6
9,991	-	nifB	DVUA0007	0.71	-3.8
9,998	+	nifB	DVUA0007	0.71	-4.4
9,999	-	nifB	DVUA0007	0.71	-2.6
9,999	-	nifB	DVUA0007	0.71	-3.8
10,084	+	nifB	DVUA0007	0.77	-4.8
10,097	-	nifB	DVUA0007	0.77	-1.8
10,153	-	nifB	DVUA0007	0.81	-2.1
10,262	+	nifB	DVUA0007	0.88	-4.0
10,275	-	nifB	DVUA0007	0.89	-3.2
10,277	-	nifB	DVUA0007	0.89	-4.6
10,370	+				+0.0
10,426	-				-5.3
10,443	-				-2.6
10,509	+				-3.7
10,532	+				-4.7
10,743	+	nifN	DVUA0008	0.19	-0.9
10,744	-	nifN	DVUA0008	0.19	-4.7
10,789	-	nifN	DVUA0008	0.22	-3.7
10,806	+	nifN	DVUA0008	0.23	-2.6
10,818	+	nifN	DVUA0008	0.24	-0.4
10,826	-	nifN	DVUA0008	0.24	-2.4
10,843	+	nifN	DVUA0008	0.25	+0.9
10,843	+	nifN	DVUA0008	0.25	-3.5
10,846	-	nifN	DVUA0008	0.26	-5.6
10,859	-	nifN	DVUA0008	0.26	-5.1
10,873	+	nifN	DVUA0008	0.27	-1.5
10,997	+	nifN	DVUA0008	0.36	-3.3
11,011	+	nifN	DVUA0008	0.37	+0.2
11,037	-	nifN	DVUA0008	0.38	-4.3
11,038	+	nifN	DVUA0008	0.38	-4.3
11,041	-	nifN	DVUA0008	0.38	-3.3
11,284	-	nifN	DVUA0008	0.55	-5.1
11,293	+	nifN	DVUA0008	0.55	-3.9
11,293	+	nifN	DVUA0008	0.55	-3.8
11,327	-	nifN	DVUA0008	0.57	-0.3
11,338	+	nifN	DVUA0008	0.58	-1.9
11,347	-	nifN	DVUA0008	0.59	-2.8
11,382	-	nifN	DVUA0008	0.61	-4.7
11,394	+	nifN	DVUA0008	0.62	-3.9
11,417	-	nifN	DVUA0008	0.63	-4.3