Strain Fitness in Pantoea sp. MT58 around IAI47_10530

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
2,230,984	-		IAI47_10520	0.41	-0.6
2,231,104	+		IAI47_10520	0.60	-1.3
2,231,104	+		IAI47_10520	0.60	-0.8
2,231,124	+		IAI47_10520	0.63	-2.7
2,231,125	-		IAI47_10520	0.63	-0.3
2,231,168	-		IAI47_10520	0.69	-0.8
2,231,168	-		IAI47_10520	0.69	-0.9
2,231,219	-		IAI47_10520	0.77	-0.2
2,231,318	-				+0.0
2,231,320	-				+0.1
2,231,320	-				-1.8
2,231,349	-				+0.3
2,231,349	-				-0.6
2,231,349	-				+0.2
2,231,369	+				+0.0
2,231,370	-				-0.0
2,231,370	-				+0.7
2,231,380	+				+0.5
2,231,390	+				-0.0
2,231,391	-				+2.5
2,231,391	-				+0.2
2,231,437	-		IAI47_10525	0.13	-0.5
2,231,443	-		IAI47_10525	0.15	+0.4
2,231,483	+		IAI47_10525	0.28	-0.4
2,231,483	+		IAI47_10525	0.28	-0.5
2,231,483	+		IAI47_10525	0.28	+0.8
2,231,483	+		IAI47_10525	0.28	-0.4
2,231,483	+		IAI47_10525	0.28	+0.2
2,231,484	-		IAI47_10525	0.28	+0.5
2,231,537	-		IAI47_10525	0.45	-1.1
2,231,553	+		IAI47_10525	0.50	-2.2
2,231,553	+		IAI47_10525	0.50	-1.3
2,231,553	+		IAI47_10525	0.50	+0.5
2,231,554	-		IAI47_10525	0.50	+0.7
2,231,554	-		IAI47_10525	0.50	-1.0
2,231,563	+		IAI47_10525	0.53	+1.7
2,231,563	+		IAI47_10525	0.53	+1.7
2,231,563	+		IAI47_10525	0.53	+1.7
2,231,563	+		IAI47_10525	0.53	-0.8
2,231,564	-		IAI47_10525	0.54	-1.2
2,231,564	-		IAI47_10525	0.54	+1.4
2,231,564	-		IAI47_10525	0.54	-0.5
2,231,564	-		IAI47_10525	0.54	-0.3
2,231,649	+		IAI47_10525	0.81	-0.5
2,231,649	+		IAI47_10525	0.81	+0.2
2,231,649	+		IAI47_10525	0.81	+0.5
2,231,649	+		IAI47_10525	0.81	-0.3
2,231,649	+		IAI47_10525	0.81	+1.0
2,231,650	-		IAI47_10525	0.81	+0.4
2,231,650	-		IAI47_10525	0.81	-1.4
2,231,650	-		IAI47_10525	0.81	-0.8
2,231,650	-		IAI47_10525	0.81	-0.9
2,231,650	-		IAI47_10525	0.81	+0.5
2,231,650	-		IAI47_10525	0.81	+0.4
2,231,650	-		IAI47_10525	0.81	-0.5
2,231,661	+		IAI47_10525	0.84	+1.2
2,231,674	+		IAI47_10525	0.89	+0.5
2,231,674	+		IAI47_10525	0.89	-2.1
2,231,674	+		IAI47_10525	0.89	-0.9
2,231,674	+		IAI47_10525	0.89	-0.0
2,231,674	+		IAI47_10525	0.89	-0.3
2,231,674	+		IAI47_10525	0.89	+0.9
2,231,675	-		IAI47_10525	0.89	+3.0
2,231,675	-		IAI47_10525	0.89	+0.5
2,231,675	-		IAI47_10525	0.89	+0.2
2,231,709	+				+0.1
2,231,710	-				+0.4
2,231,710	-				+0.7
2,231,710	-				+0.4
2,231,742	+				-0.9
2,231,742	+				+0.3
2,231,742	+				+1.2
2,231,742	+				+0.1
2,231,743	-				+0.3
2,231,743	-				-0.2
2,231,743	-				+0.2
2,231,743	-				-0.6
2,231,743	-				-0.0
2,231,743	-				-0.9
2,231,743	-				+0.2
2,231,744	+				-1.4
2,231,744	+				-1.2
2,231,744	+				+1.3
2,231,744	+				+0.6
2,231,744	+				+1.8
2,231,744	+				-1.0
2,231,744	+				+0.5
2,231,744	+				+1.0
2,231,744	+				-0.2
2,231,745	-				-0.3
2,231,745	-				+1.8
2,231,745	-				+1.5
2,231,745	-				-0.1
2,231,745	-				-0.8
2,231,745	-				+0.3
2,231,745	-				+1.1
2,231,745	-				+1.4
2,231,745	-				+0.5
2,231,745	-				+0.5
2,231,745	-				-0.3
2,231,765	+				-0.7
2,231,766	-				+2.0
2,231,766	-				+0.5
2,231,858	-				-0.0
2,231,865	+				+0.1
2,231,872	+				-0.5
2,231,873	-				+0.2
2,231,873	-				-1.4
2,231,874	+				+0.8
2,231,874	+				+1.9
2,231,875	-				+0.2
2,231,875	-				+2.5
2,231,881	+				+0.5
2,231,882	-				-0.9
2,231,882	-				-0.0
2,231,925	+		IAI47_10530	0.13	-0.3
2,231,925	+		IAI47_10530	0.13	-0.9
2,231,925	+		IAI47_10530	0.13	-0.6
2,231,926	-		IAI47_10530	0.13	-1.3
2,231,926	-		IAI47_10530	0.13	-0.7
2,231,926	-		IAI47_10530	0.13	-2.3
2,231,926	-		IAI47_10530	0.13	+0.7
2,231,943	+		IAI47_10530	0.22	-1.0
2,231,943	+		IAI47_10530	0.22	+0.4
2,231,943	+		IAI47_10530	0.22	-1.1
2,231,944	-		IAI47_10530	0.22	-1.0
2,231,944	-		IAI47_10530	0.22	-1.3
2,231,953	-		IAI47_10530	0.26	-2.5
2,231,981	-		IAI47_10530	0.40	-0.6
2,231,981	-		IAI47_10530	0.40	+0.0
2,231,981	-		IAI47_10530	0.40	-0.6
2,231,985	+		IAI47_10530	0.42	+1.2
2,231,985	+		IAI47_10530	0.42	-1.3
2,231,986	-		IAI47_10530	0.43	-0.3
2,232,004	+		IAI47_10530	0.51	-0.6
2,232,004	+		IAI47_10530	0.51	-0.5
2,232,005	-		IAI47_10530	0.52	-0.0
2,232,093	+				-0.3
2,232,093	+				+2.0
2,232,094	-				+1.1
2,232,094	-				+0.4
2,232,094	-				-0.7
2,232,149	+				-1.3
2,232,149	+				-1.0
2,232,210	+				-0.0
2,232,211	-				-0.8
2,232,211	-				-0.3
2,232,223	+				-1.4
2,232,223	+				+0.8
2,232,224	-				+0.2
2,232,224	-				+0.0
2,232,224	-				-0.4
2,232,283	-				+0.3
2,232,313	-				-1.1
2,232,334	+				-0.2
2,232,334	+				-1.9
2,232,334	+				-0.3
2,232,334	+				-2.3
2,232,335	-				-0.0
2,232,335	-				+0.9
2,232,335	-				+1.2
2,232,335	-				-0.9
2,232,346	+				+0.7
2,232,346	+				+0.7
2,232,346	+				+0.4
2,232,346	+				-0.4
2,232,346	+				+0.1
2,232,346	+				+0.4
2,232,346	+				+0.3
2,232,346	+				-0.2
2,232,346	+				+0.9
2,232,347	-				-0.3
2,232,347	-				+0.5
2,232,347	-				+0.4
2,232,347	-				-1.8
2,232,347	-				+0.2
2,232,347	-				-0.5
2,232,347	-				+1.0
2,232,406	-				-0.7
2,232,415	+				+1.4
2,232,422	+				-0.1
2,232,422	+				-0.3
2,232,422	+				-0.1
2,232,423	-				+1.1
2,232,434	+				+0.5
2,232,434	+				+0.3
2,232,434	+				-1.5
2,232,435	-				+0.8
2,232,435	-				-0.3
2,232,436	+				+0.8
2,232,436	+				+0.7
2,232,436	+				+1.5
2,232,437	-				+1.0
2,232,437	-				+0.2
2,232,437	-				-0.5
2,232,437	-				+1.4
2,232,437	-				-2.1
2,232,437	-				-0.4
2,232,437	-				+0.8
2,232,501	+		IAI47_10535	0.20	-0.5
2,232,502	-		IAI47_10535	0.20	-1.0
2,232,505	+		IAI47_10535	0.21	-0.3
2,232,505	+		IAI47_10535	0.21	+0.7
2,232,505	+		IAI47_10535	0.21	+1.8
2,232,505	+		IAI47_10535	0.21	+1.3
2,232,505	+		IAI47_10535	0.21	+1.4
2,232,506	-		IAI47_10535	0.22	-0.8
2,232,506	-		IAI47_10535	0.22	-0.8
2,232,535	+		IAI47_10535	0.34	+1.4
2,232,535	+		IAI47_10535	0.34	-0.3
2,232,535	+		IAI47_10535	0.34	+0.5
2,232,535	+		IAI47_10535	0.34	+0.2
2,232,535	+		IAI47_10535	0.34	-0.1
2,232,536	-		IAI47_10535	0.35	-0.9
2,232,536	-		IAI47_10535	0.35	-1.0
2,232,536	-		IAI47_10535	0.35	-0.6
2,232,536	-		IAI47_10535	0.35	+0.2
2,232,538	+		IAI47_10535	0.35	+0.1
2,232,538	+		IAI47_10535	0.35	-0.4
2,232,539	-		IAI47_10535	0.36	+0.7
2,232,539	-		IAI47_10535	0.36	+0.5
2,232,686	+				+0.2
2,232,686	+				+0.5
2,232,687	-				+0.5
2,232,687	-				-0.2
2,232,687	-				+0.2
2,232,689	+				+1.1
2,232,689	+				+0.9
2,232,689	+				-0.3
2,232,690	-				-1.7
2,232,692	-				+0.4
2,232,723	+				+1.3
2,232,723	+				-0.6
2,232,723	+				+0.9
2,232,745	+		IAI47_10540	0.18	+1.0
2,232,745	+		IAI47_10540	0.18	-0.8
2,232,745	+		IAI47_10540	0.18	-0.2
2,232,745	+		IAI47_10540	0.18	-1.3
2,232,746	-		IAI47_10540	0.18	-2.0
2,232,746	-		IAI47_10540	0.18	+0.0
2,232,746	-		IAI47_10540	0.18	+0.2
2,232,746	-		IAI47_10540	0.18	-0.0
2,232,746	-		IAI47_10540	0.18	-1.5
2,232,753	+		IAI47_10540	0.21	-0.5
2,232,753	+		IAI47_10540	0.21	+0.5
2,232,754	-		IAI47_10540	0.22	-1.5
2,232,754	-		IAI47_10540	0.22	-0.8
2,232,754	-		IAI47_10540	0.22	-1.0
2,232,756	+		IAI47_10540	0.23	+0.5
2,232,756	+		IAI47_10540	0.23	+0.8
2,232,757	-		IAI47_10540	0.23	+0.4
2,232,757	-		IAI47_10540	0.23	-0.4
2,232,773	-		IAI47_10540	0.30	+1.7
2,232,779	+		IAI47_10540	0.32	+1.6
2,232,779	+		IAI47_10540	0.32	+0.4
2,232,779	+		IAI47_10540	0.32	+0.8
2,232,780	-		IAI47_10540	0.33	-0.0
2,232,811	+		IAI47_10540	0.46	+0.9
2,232,811	+		IAI47_10540	0.46	+0.5
2,232,812	-		IAI47_10540	0.47	-0.9
2,232,812	-		IAI47_10540	0.47	+0.0
2,232,814	+		IAI47_10540	0.48	+0.3
2,232,815	-		IAI47_10540	0.48	-0.0
2,232,858	-		IAI47_10540	0.67	-2.3
2,232,859	+		IAI47_10540	0.67	-1.3
2,232,892	+		IAI47_10540	0.81	+0.4
2,232,893	-		IAI47_10540	0.82	+0.5
2,232,893	-		IAI47_10540	0.82	-1.1
2,232,932	+				+0.3
2,232,958	+				+0.7
2,232,968	+				-1.5
2,233,012	-				+1.0
2,233,012	-				+1.3
2,233,012	-				+0.8
2,233,013	+				+1.7
2,233,013	+				+0.5
2,233,014	-				+0.0
2,233,071	+				-1.1
2,233,087	+				+0.1
2,233,088	-				+0.2
2,233,088	-				+1.3
2,233,088	-				-1.2
2,233,089	+				-2.2
2,233,090	-				-0.2