Strain Fitness in Marinobacter adhaerens HP15 around HP15_2496
Experiment: m.b. Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,634,835 | - | HP15_2495 | 0.37 | +0.3 | |
2,634,863 | - | HP15_2495 | 0.40 | -0.9 | |
2,634,867 | - | HP15_2495 | 0.40 | +0.5 | |
2,635,183 | - | HP15_2495 | 0.67 | +1.5 | |
2,635,185 | - | HP15_2495 | 0.67 | +0.3 | |
2,635,245 | - | HP15_2495 | 0.72 | +0.3 | |
2,635,507 | - | +0.4 | |||
2,635,747 | + | -1.8 | |||
2,635,755 | - | -1.3 | |||
2,635,953 | + | HP15_2496 | 0.24 | -4.2 | |
2,636,179 | + | HP15_2496 | 0.50 | -3.0 | |
2,636,187 | - | HP15_2496 | 0.51 | -3.1 | |
2,636,498 | - | HP15_2496 | 0.87 | -2.7 | |
2,636,516 | + | HP15_2496 | 0.89 | -3.0 | |
2,636,647 | + | -3.0 | |||
2,636,817 | - | HP15_2497 | 0.16 | -0.3 | |
2,637,209 | + | HP15_2497 | 0.49 | -3.0 | |
2,637,274 | - | HP15_2497 | 0.54 | -3.3 | |
2,637,288 | + | HP15_2497 | 0.56 | -3.7 | |
2,637,356 | - | HP15_2497 | 0.61 | -1.8 | |
2,637,425 | + | HP15_2497 | 0.67 | -3.4 | |
2,637,547 | + | HP15_2497 | 0.77 | -2.6 |
Or see this region's nucleotide sequence