Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19870
Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
2,061,880 | - | +0.0 | |||
2,061,886 | - | -0.1 | |||
2,061,888 | + | -0.0 | |||
2,062,043 | + | PGA1_c19860 | 0.22 | -0.6 | |
2,062,064 | - | PGA1_c19860 | 0.24 | -0.7 | |
2,062,064 | - | PGA1_c19860 | 0.24 | +0.1 | |
2,062,095 | - | PGA1_c19860 | 0.28 | +0.2 | |
2,062,139 | - | PGA1_c19860 | 0.33 | -0.4 | |
2,062,169 | + | PGA1_c19860 | 0.37 | -0.6 | |
2,062,174 | + | PGA1_c19860 | 0.37 | -1.0 | |
2,062,192 | - | PGA1_c19860 | 0.39 | -0.0 | |
2,062,292 | + | PGA1_c19860 | 0.51 | -0.1 | |
2,062,343 | - | PGA1_c19860 | 0.57 | -0.6 | |
2,062,368 | - | PGA1_c19860 | 0.60 | -0.8 | |
2,062,406 | + | PGA1_c19860 | 0.65 | -0.9 | |
2,062,549 | - | PGA1_c19860 | 0.82 | +0.5 | |
2,062,573 | + | PGA1_c19860 | 0.84 | +0.3 | |
2,062,616 | - | PGA1_c19860 | 0.89 | +0.5 | |
2,062,650 | + | -2.5 | |||
2,062,650 | + | +0.4 | |||
2,062,663 | - | -0.4 | |||
2,062,672 | + | -1.3 | |||
2,062,698 | + | +0.4 | |||
2,062,701 | - | +0.5 | |||
2,062,726 | - | +0.1 | |||
2,062,918 | - | PGA1_c19870 | 0.10 | -0.0 | |
2,063,023 | - | PGA1_c19870 | 0.25 | +0.3 | |
2,063,044 | - | PGA1_c19870 | 0.28 | +0.9 | |
2,063,582 | - | +0.0 | |||
2,063,812 | - | +0.2 | |||
2,063,817 | + | +0.1 |
Or see this region's nucleotide sequence