Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18820
Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,953,660 | + | PGA1_c18810 | 0.44 | -2.4 | |
1,954,296 | - | PGA1_c18820 | 0.14 | -1.2 | |
1,954,303 | + | PGA1_c18820 | 0.15 | -0.0 | |
1,954,450 | - | PGA1_c18820 | 0.35 | +0.7 | |
1,954,623 | + | PGA1_c18820 | 0.58 | +1.0 | |
1,954,623 | + | PGA1_c18820 | 0.58 | +0.2 | |
1,954,623 | + | PGA1_c18820 | 0.58 | +0.6 | |
1,954,631 | - | PGA1_c18820 | 0.59 | -0.7 | |
1,954,652 | + | PGA1_c18820 | 0.62 | +0.1 | |
1,954,660 | - | PGA1_c18820 | 0.63 | +0.4 | |
1,954,733 | - | PGA1_c18820 | 0.73 | +1.2 | |
1,954,797 | + | PGA1_c18820 | 0.82 | +0.5 | |
1,954,843 | - | PGA1_c18820 | 0.88 | -1.8 | |
1,954,859 | + | -1.2 | |||
1,954,867 | - | -0.3 | |||
1,954,949 | + | -0.5 | |||
1,954,971 | + | -0.2 | |||
1,954,971 | + | +0.1 | |||
1,954,971 | + | +0.1 | |||
1,954,979 | - | -0.8 | |||
1,954,979 | - | +0.4 | |||
1,954,979 | - | +0.2 | |||
1,955,005 | + | -0.6 | |||
1,955,005 | + | -0.4 | |||
1,955,005 | + | -0.0 | |||
1,955,005 | + | -1.3 | |||
1,955,013 | - | -0.1 | |||
1,955,013 | - | -0.0 | |||
1,955,023 | - | -1.4 |
Or see this region's nucleotide sequence