Strain Fitness in Marinobacter adhaerens HP15 around HP15_3343
Experiment: m.b. Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Sisomicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,504,523 | + | +0.5 | |||
3,504,530 | - | +1.0 | |||
3,504,645 | + | +0.9 | |||
3,504,696 | - | +0.1 | |||
3,504,894 | + | HP15_3343 | 0.72 | -1.2 | |
3,504,989 | + | -0.1 | |||
3,504,989 | + | -1.1 | |||
3,505,121 | - | -0.2 | |||
3,505,208 | + | +0.3 | |||
3,505,208 | + | +0.3 | |||
3,505,216 | - | HP15_3344 | 0.10 | -0.6 | |
3,505,216 | - | HP15_3344 | 0.10 | -1.0 | |
3,505,216 | - | HP15_3344 | 0.10 | -0.1 | |
3,505,343 | + | HP15_3344 | 0.18 | -0.2 | |
3,505,432 | + | HP15_3344 | 0.24 | -0.2 | |
3,505,457 | + | HP15_3344 | 0.26 | +0.1 | |
3,505,490 | + | HP15_3344 | 0.28 | -0.6 | |
3,505,504 | + | HP15_3344 | 0.29 | +0.8 | |
3,505,507 | - | HP15_3344 | 0.29 | -0.2 | |
3,505,507 | - | HP15_3344 | 0.29 | -0.1 | |
3,505,548 | + | HP15_3344 | 0.31 | -0.0 | |
3,505,575 | + | HP15_3344 | 0.33 | +0.0 | |
3,505,589 | - | HP15_3344 | 0.34 | -0.1 | |
3,505,674 | + | HP15_3344 | 0.40 | -0.4 | |
3,505,712 | + | HP15_3344 | 0.42 | -0.8 | |
3,505,747 | + | HP15_3344 | 0.44 | +0.1 | |
3,505,817 | - | HP15_3344 | 0.49 | -0.6 | |
3,505,898 | + | HP15_3344 | 0.54 | -0.1 |
Or see this region's nucleotide sequence