Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22740

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
2,355,665	+		PGA1_c22730	0.16	+0.6
2,355,683	-		PGA1_c22730	0.18	-1.1
2,355,683	-		PGA1_c22730	0.18	+0.5
2,355,690	+		PGA1_c22730	0.18	+0.2
2,355,704	-		PGA1_c22730	0.20	+0.3
2,355,708	-		PGA1_c22730	0.20	+0.6
2,355,710	+		PGA1_c22730	0.20	-0.4
2,355,742	+		PGA1_c22730	0.23	+0.2
2,355,771	+		PGA1_c22730	0.25	+0.6
2,355,779	-		PGA1_c22730	0.26	+0.4
2,355,781	+		PGA1_c22730	0.26	+0.9
2,355,781	+		PGA1_c22730	0.26	+0.2
2,355,789	+		PGA1_c22730	0.27	+0.7
2,355,789	-		PGA1_c22730	0.27	+0.3
2,355,789	-		PGA1_c22730	0.27	+0.4
2,355,789	-		PGA1_c22730	0.27	-0.1
2,355,791	+		PGA1_c22730	0.27	+0.0
2,355,791	+		PGA1_c22730	0.27	-0.5
2,355,794	-		PGA1_c22730	0.27	-0.2
2,355,839	+		PGA1_c22730	0.31	-0.0
2,355,893	-		PGA1_c22730	0.36	+0.3
2,356,016	+		PGA1_c22730	0.46	+1.3
2,356,079	-		PGA1_c22730	0.51	+0.8
2,356,079	-		PGA1_c22730	0.51	+0.2
2,356,079	-		PGA1_c22730	0.51	+0.3
2,356,119	+		PGA1_c22730	0.55	+0.5
2,356,148	+		PGA1_c22730	0.57	-0.5
2,356,171	+		PGA1_c22730	0.59	+0.2
2,356,177	-		PGA1_c22730	0.60	+0.7
2,356,179	-		PGA1_c22730	0.60	-0.6
2,356,211	+		PGA1_c22730	0.62	-0.0
2,356,326	+		PGA1_c22730	0.72	+0.1
2,356,326	+		PGA1_c22730	0.72	-0.4
2,356,344	+		PGA1_c22730	0.74	+0.1
2,356,381	+		PGA1_c22730	0.77	+0.3
2,356,384	-		PGA1_c22730	0.77	-0.4
2,356,393	-		PGA1_c22730	0.78	+0.7
2,356,429	+		PGA1_c22730	0.81	-0.2
2,356,471	-		PGA1_c22730	0.84	-1.0
2,356,487	-		PGA1_c22730	0.86	+1.0
2,356,597	+				+1.5
2,356,605	-				-0.7
2,356,610	+				+0.6
2,356,618	-				-0.5
2,356,630	+				+1.9
2,356,731	+				-0.2
2,356,739	-				-0.1
2,356,750	-				+0.6
2,356,768	+				-0.4
2,356,806	-				-0.9
2,356,813	+				+0.2
2,356,821	-				+0.2
2,356,826	-				+0.6
2,356,853	+				+0.9
2,356,876	+		PGA1_c22740	0.11	-1.3
2,356,992	+		PGA1_c22740	0.16	+0.6
2,357,019	-		PGA1_c22740	0.17	+0.6
2,357,058	-		PGA1_c22740	0.19	+0.0
2,357,118	-		PGA1_c22740	0.22	-0.4
2,357,120	+		PGA1_c22740	0.22	-0.4
2,357,120	+		PGA1_c22740	0.22	+0.7
2,357,120	+		PGA1_c22740	0.22	-0.1
2,357,128	-		PGA1_c22740	0.22	+0.6
2,357,128	-		PGA1_c22740	0.22	+0.7
2,357,128	-		PGA1_c22740	0.22	-0.1
2,357,138	-		PGA1_c22740	0.23	-0.2
2,357,138	-		PGA1_c22740	0.23	-0.4
2,357,138	-		PGA1_c22740	0.23	+0.1
2,357,234	-		PGA1_c22740	0.27	-0.2
2,357,283	+		PGA1_c22740	0.30	-0.5
2,357,342	+		PGA1_c22740	0.33	-0.2
2,357,349	-		PGA1_c22740	0.33	-1.3
2,357,367	-		PGA1_c22740	0.34	-0.4
2,357,443	+		PGA1_c22740	0.37	-1.1
2,357,462	-		PGA1_c22740	0.38	-0.3
2,357,468	-		PGA1_c22740	0.38	-0.1
2,357,498	-		PGA1_c22740	0.40	-2.6
2,357,511	-		PGA1_c22740	0.40	+0.9
2,357,511	-		PGA1_c22740	0.40	+0.2
2,357,565	+		PGA1_c22740	0.43	-0.8
2,357,571	+		PGA1_c22740	0.43	-0.3
2,357,579	-		PGA1_c22740	0.44	-1.0
2,357,584	+		PGA1_c22740	0.44	-0.0
2,357,584	+		PGA1_c22740	0.44	-1.9
2,357,593	-		PGA1_c22740	0.44	+0.9
2,357,652	+		PGA1_c22740	0.47	+0.2
2,357,652	+		PGA1_c22740	0.47	+1.1
2,357,662	+		PGA1_c22740	0.48	-0.0
2,357,667	+		PGA1_c22740	0.48	-0.3
2,357,670	-		PGA1_c22740	0.48	+0.2
2,357,673	-		PGA1_c22740	0.48	-1.8
2,357,673	-		PGA1_c22740	0.48	+0.5
2,357,673	-		PGA1_c22740	0.48	-0.8
2,357,704	+		PGA1_c22740	0.50	-0.2
2,357,718	+		PGA1_c22740	0.50	-0.6
2,357,731	-		PGA1_c22740	0.51	+0.1
2,357,799	+		PGA1_c22740	0.54	-0.5
2,357,807	-		PGA1_c22740	0.54	-0.2
2,357,954	+		PGA1_c22740	0.61	-0.4
2,357,975	+		PGA1_c22740	0.62	-0.0
2,357,993	-		PGA1_c22740	0.63	+0.9
2,357,993	-		PGA1_c22740	0.63	+0.3
2,357,993	-		PGA1_c22740	0.63	-0.0
2,357,995	-		PGA1_c22740	0.63	+0.3
2,357,995	-		PGA1_c22740	0.63	+0.3
2,358,054	+		PGA1_c22740	0.66	-0.4
2,358,073	-		PGA1_c22740	0.67	-0.1
2,358,076	+		PGA1_c22740	0.67	-0.3
2,358,111	+		PGA1_c22740	0.69	-0.3
2,358,162	+		PGA1_c22740	0.71	+0.5
2,358,186	+		PGA1_c22740	0.72	-0.3
2,358,208	-		PGA1_c22740	0.73	-0.2
2,358,251	+		PGA1_c22740	0.75	-0.4
2,358,257	-		PGA1_c22740	0.76	+0.4
2,358,261	+		PGA1_c22740	0.76	-0.5
2,358,266	+		PGA1_c22740	0.76	+0.5
2,358,274	-		PGA1_c22740	0.76	-0.4
2,358,281	-		PGA1_c22740	0.77	+0.1
2,358,281	-		PGA1_c22740	0.77	-0.6
2,358,317	-		PGA1_c22740	0.79	-0.4
2,358,317	-		PGA1_c22740	0.79	-1.3
2,358,334	+		PGA1_c22740	0.79	+0.3
2,358,366	+		PGA1_c22740	0.81	+0.2
2,358,388	+		PGA1_c22740	0.82	-0.6
2,358,411	-		PGA1_c22740	0.83	+0.0
2,358,539	-		PGA1_c22740	0.89	+0.5
2,358,546	-		PGA1_c22740	0.89	+0.3
2,358,546	-		PGA1_c22740	0.89	-0.8
2,358,546	-		PGA1_c22740	0.89	+1.3
2,358,546	-		PGA1_c22740	0.89	+0.2
2,358,546	-		PGA1_c22740	0.89	-0.2
2,358,546	-		PGA1_c22740	0.89	+0.4
2,358,546	-		PGA1_c22740	0.89	-1.4
2,358,546	-		PGA1_c22740	0.89	+1.0
2,358,547	+		PGA1_c22740	0.89	-0.3
2,358,547	+		PGA1_c22740	0.89	+0.9
2,358,555	-		PGA1_c22740	0.90	+0.8
2,358,555	-		PGA1_c22740	0.90	-0.9
2,358,555	-		PGA1_c22740	0.90	-0.2
2,358,555	-		PGA1_c22740	0.90	+0.8
2,358,557	+		PGA1_c22740	0.90	-0.7
2,358,565	-				+0.9
2,358,636	+				+0.5
2,358,636	+				+0.2
2,358,636	+				-0.4
2,358,636	+				-2.1
2,358,636	+				+0.3
2,358,644	-				+0.4
2,358,644	-				-0.7
2,358,644	-				+0.4
2,358,646	+				+0.0
2,358,700	+				-1.1
2,358,700	+				+0.4
2,358,739	+				+1.7
2,358,747	+				-0.4
2,358,747	+				-0.6
2,358,747	+				-0.4
2,358,747	+				+0.5
2,358,747	+				-0.5
2,358,747	+				+0.1
2,358,747	+				+0.5
2,358,747	+				-1.9
2,358,747	+				-0.4
2,358,755	-				+0.2
2,358,755	-				+0.9
2,358,829	-				-0.5
2,358,837	+				-0.0
2,358,845	-				+0.8
2,358,858	-		PGA1_c22750	0.11	-0.4
2,358,964	-		PGA1_c22750	0.26	+0.8
2,359,008	+		PGA1_c22750	0.33	+0.2
2,359,008	+		PGA1_c22750	0.33	+0.2
2,359,015	+		PGA1_c22750	0.34	-0.2
2,359,016	-		PGA1_c22750	0.34	+0.6
2,359,016	-		PGA1_c22750	0.34	+0.4
2,359,020	+		PGA1_c22750	0.34	-0.8
2,359,028	-		PGA1_c22750	0.36	-0.2
2,359,028	-		PGA1_c22750	0.36	-0.0
2,359,083	+		PGA1_c22750	0.44	+0.7
2,359,098	+		PGA1_c22750	0.46	+0.2
2,359,104	+		PGA1_c22750	0.47	+1.1
2,359,104	+		PGA1_c22750	0.47	-1.6
2,359,104	+		PGA1_c22750	0.47	+0.5
2,359,104	+		PGA1_c22750	0.47	-1.2
2,359,107	-		PGA1_c22750	0.47	+0.5
2,359,112	-		PGA1_c22750	0.48	+0.6
2,359,118	+		PGA1_c22750	0.49	+0.1
2,359,133	+		PGA1_c22750	0.51	+0.4
2,359,133	+		PGA1_c22750	0.51	-0.1
2,359,133	+		PGA1_c22750	0.51	+0.8
2,359,133	+		PGA1_c22750	0.51	+0.1
2,359,141	-		PGA1_c22750	0.52	+0.7
2,359,141	-		PGA1_c22750	0.52	-3.0
2,359,147	-		PGA1_c22750	0.53	-1.1
2,359,147	-		PGA1_c22750	0.53	-0.5
2,359,210	+		PGA1_c22750	0.62	+0.2
2,359,210	+		PGA1_c22750	0.62	+0.0
2,359,230	+		PGA1_c22750	0.65	+0.4
2,359,288	+		PGA1_c22750	0.73	+0.5
2,359,296	-		PGA1_c22750	0.75	+0.2
2,359,296	-		PGA1_c22750	0.75	+1.2
2,359,296	-		PGA1_c22750	0.75	-0.4
2,359,335	+		PGA1_c22750	0.80	+0.3
2,359,343	+		PGA1_c22750	0.81	+1.5
2,359,343	+		PGA1_c22750	0.81	+0.1
2,359,351	-		PGA1_c22750	0.83	+0.6
2,359,351	-		PGA1_c22750	0.83	-0.2
2,359,351	-		PGA1_c22750	0.83	+0.3
2,359,358	+		PGA1_c22750	0.84	-0.7
2,359,380	+		PGA1_c22750	0.87	-0.3
2,359,380	+		PGA1_c22750	0.87	-0.3
2,359,380	+		PGA1_c22750	0.87	+1.2
2,359,388	-		PGA1_c22750	0.88	-0.5
2,359,388	-		PGA1_c22750	0.88	+1.0
2,359,403	+				-1.1
2,359,411	-				+0.7
2,359,425	+				+0.3
2,359,428	-				-0.3
2,359,536	+				-0.1
2,359,569	+				+0.3
2,359,641	+		PGA1_c22760	0.11	-1.3
2,359,690	-		PGA1_c22760	0.14	-0.2
2,359,690	-		PGA1_c22760	0.14	-0.3
2,359,754	+		PGA1_c22760	0.18	-0.4