Strain Fitness in Pantoea sp. MT58 around IAI47_19320

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
87,739	+				-0.3
87,740	-				+1.0
87,744	+				+1.7
87,764	-				+1.8
87,764	-				+0.9
87,787	-				+1.0
87,811	+				-0.4
87,812	-				+0.1
87,825	-				+0.3
87,825	-				+0.3
87,830	+				+1.0
87,830	+				+0.6
87,830	+				-0.9
87,831	-				+1.2
87,831	-				+1.1
87,831	-				-0.4
87,831	-				+2.6
87,831	-				+0.8
87,852	-				-0.1
87,860	+				+0.7
87,861	-				+0.1
87,881	+				+0.1
87,882	-				+1.4
87,882	-				-0.5
87,882	-				+0.4
87,882	-				+1.1
87,883	+				-0.3
87,883	+				-0.0
87,884	-				-0.2
87,884	-				+2.3
87,884	-				+2.2
87,884	-				+0.2
87,893	+				+0.6
87,893	+				+0.0
87,951	+				-0.5
87,951	+				-1.3
87,951	+				-1.6
87,952	-				+2.3
87,962	-				+1.0
87,962	-				+1.5
87,982	+				+0.7
87,983	-				+1.0
87,995	+				+0.3
87,995	+				-0.3
87,995	+				-0.4
87,995	+				-0.0
87,995	+				-0.9
87,996	-				+2.0
87,996	-				-1.2
87,996	-				-0.7
87,996	-				-0.4
87,996	-				+1.4
87,998	+				-0.7
87,998	+				+0.7
87,998	+				-0.4
87,999	-				-1.9
87,999	-				+0.8
87,999	-				+0.8
87,999	-				-0.1
87,999	-				+0.3
88,005	+				+0.2
88,006	-				+0.9
88,006	-				-0.0
88,006	-				+0.8
88,006	-				+1.4
88,009	+				-1.9
88,051	+				+0.9
88,051	+				+0.2
88,052	-				+0.7
88,052	-				+0.2
88,093	-				-0.0
88,101	-				+1.0
88,107	+				+0.2
88,107	+				+0.0
88,108	-				+0.6
88,108	-				+1.8
88,108	-				-0.0
88,108	-				+0.3
88,117	+				+1.4
88,117	+				+0.1
88,118	-				+0.4
88,118	-				+0.6
88,131	+				-1.1
88,131	+				-0.8
88,131	+				-0.7
88,132	-				-0.7
88,132	-				-0.8
88,162	-				-0.2
88,162	-				-0.1
88,162	-				-0.3
88,162	-				-1.2
88,162	-				+0.5
88,173	+				+1.3
88,210	+				-2.5
88,210	+				-1.9
88,222	-				+0.1
88,267	+				-0.2
88,267	+				+0.6
88,271	+				+1.3
88,279	+				+0.4
88,290	+				+1.3
88,290	+				-1.3
88,291	-				-0.3
88,291	-				+0.4
88,300	+				-1.8
88,314	+				-0.3
88,314	+				+0.7
88,314	+				+0.8
88,314	+				-0.1
88,315	-				+1.2
88,315	-				+0.2
88,317	+				-0.0
88,317	+				+0.5
88,317	+				-0.1
88,317	+				+0.3
88,318	-				+1.0
88,318	-				+0.8
88,365	+		IAI47_19315	0.18	+0.3
88,365	+		IAI47_19315	0.18	+0.8
88,365	+		IAI47_19315	0.18	+1.9
88,432	-		IAI47_19315	0.45	-0.9
88,432	-		IAI47_19315	0.45	+0.6
88,432	-		IAI47_19315	0.45	-0.6
88,454	-		IAI47_19315	0.54	+0.4
88,482	-		IAI47_19315	0.65	-2.2
88,489	+		IAI47_19315	0.68	+0.5
88,490	-		IAI47_19315	0.68	+0.8
88,493	+		IAI47_19315	0.69	-0.8
88,493	+		IAI47_19315	0.69	-0.8
88,494	-		IAI47_19315	0.70	-0.8
88,517	+		IAI47_19315	0.79	+0.2
88,517	+		IAI47_19315	0.79	-1.4
88,517	+		IAI47_19315	0.79	-1.0
88,520	+		IAI47_19315	0.80	+0.3
88,521	-		IAI47_19315	0.81	-0.0
88,521	-		IAI47_19315	0.81	-1.2
88,566	+				+0.8
88,567	-				+0.5
88,570	-				+0.5
88,570	-				-0.4
88,573	-				-1.0
88,582	-				+1.7
88,618	-				+2.2
88,813	+		IAI47_19320	0.21	-0.8
88,813	+		IAI47_19320	0.21	-1.2
88,814	-		IAI47_19320	0.21	-0.2
88,816	+		IAI47_19320	0.21	-1.9
88,817	-		IAI47_19320	0.21	+0.5
88,826	+		IAI47_19320	0.23	+0.9
88,837	+		IAI47_19320	0.24	-0.5
88,847	+		IAI47_19320	0.26	+0.8
88,877	+		IAI47_19320	0.31	+0.6
88,878	-		IAI47_19320	0.31	-1.4
88,923	+		IAI47_19320	0.38	-0.5
88,947	-		IAI47_19320	0.42	-1.4
88,949	+		IAI47_19320	0.42	-1.0
88,954	+		IAI47_19320	0.43	+1.1
88,954	+		IAI47_19320	0.43	-1.4
88,994	+		IAI47_19320	0.49	-0.5
88,994	+		IAI47_19320	0.49	+0.1
89,039	-		IAI47_19320	0.56	-1.5
89,058	+		IAI47_19320	0.59	-0.2
89,061	-		IAI47_19320	0.60	+0.4
89,098	-		IAI47_19320	0.66	-0.4
89,098	-		IAI47_19320	0.66	-0.5
89,104	-		IAI47_19320	0.67	+1.0
89,150	+		IAI47_19320	0.74	+0.1
89,150	+		IAI47_19320	0.74	+0.2
89,151	-		IAI47_19320	0.74	+0.2
89,151	-		IAI47_19320	0.74	-1.1
89,154	+		IAI47_19320	0.75	-2.7
89,155	-		IAI47_19320	0.75	-1.2
89,155	-		IAI47_19320	0.75	-0.7
89,155	-		IAI47_19320	0.75	+0.4
89,156	+		IAI47_19320	0.75	-0.5
89,156	+		IAI47_19320	0.75	+1.2
89,183	+		IAI47_19320	0.79	-0.4
89,184	-		IAI47_19320	0.79	-0.1
89,190	-		IAI47_19320	0.80	-0.2
89,217	-		IAI47_19320	0.85	+1.9
89,236	-		IAI47_19320	0.88	-0.3
89,258	+				-0.3
89,259	-				-0.2
89,259	-				-0.8
89,303	-				-0.9
89,352	-				+1.8
89,374	+				-0.2
89,391	-				+0.4
89,419	-				-1.3
89,450	+				-0.1
89,473	-				+1.6
89,497	+				-0.5
89,507	-				-0.4
89,510	+				+1.4
89,535	-				-1.1
89,548	+				+0.8
89,552	-				-0.3
89,602	+				+0.3
89,619	-				-1.8
89,658	-				-0.1
89,689	+				+1.0
89,736	-				+0.5
89,864	+				-0.5
89,865	-				+0.3
89,866	+				-0.2
89,866	+				-0.7
89,867	-				+1.2
89,910	+				+0.8
89,910	+				+1.1
89,915	-				-0.7
89,926	-				+0.2
89,939	+				+1.3
89,940	-				-0.2
89,957	+				+0.3
89,959	+				+1.2
89,960	-				+0.0
89,960	-				+1.4
89,960	-				-1.7
90,005	+		IAI47_19325	0.13	-0.6
90,005	+		IAI47_19325	0.13	-0.1
90,049	+		IAI47_19325	0.28	+0.1
90,049	+		IAI47_19325	0.28	-1.6
90,049	+		IAI47_19325	0.28	+1.0
90,049	+		IAI47_19325	0.28	-1.3
90,049	+		IAI47_19325	0.28	+0.2
90,049	+		IAI47_19325	0.28	-0.4
90,050	-		IAI47_19325	0.28	+1.8
90,050	-		IAI47_19325	0.28	-0.9
90,090	-		IAI47_19325	0.42	-1.7
90,142	+		IAI47_19325	0.61	-0.9
90,245	+				+0.4
90,245	+				-0.4
90,284	+				+0.3
90,284	+				+1.2
90,284	+				+0.0
90,284	+				+0.1
90,284	+				+2.1
90,284	+				+0.8
90,285	-				-0.2
90,285	-				-0.8
90,285	-				-0.3
90,285	-				+0.2
90,285	-				-0.5
90,287	+				+0.6
90,288	-				+0.1
90,298	-				+0.2
90,298	-				+1.7
90,301	+				-0.9
90,301	+				+0.0
90,301	+				+0.2