Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4112 and HP15_4113 are separated by 294 nucleotides HP15_4113 and HP15_4114 overlap by 4 nucleotides HP15_4114 and HP15_4115 are separated by 94 nucleotides
HP15_4112: HP15_4112 - methyl-accepting chemotaxis protein, at 4,346,502 to 4,348,427
_4112
HP15_4113: HP15_4113 - hypothetical protein, at 4,348,722 to 4,349,315
_4113
HP15_4114: HP15_4114 - hypothetical protein, at 4,349,312 to 4,349,563
_4114
HP15_4115: HP15_4115 - sensory box/GGDEF/EAL family protein, at 4,349,658 to 4,352,093
_4115
Position (kb)
4348
4349
4350 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4347.723 kb on - strand, within HP15_4112 at 4347.771 kb on + strand, within HP15_4112 at 4347.779 kb on - strand, within HP15_4112 at 4347.783 kb on + strand, within HP15_4112 at 4347.807 kb on - strand, within HP15_4112 at 4347.862 kb on - strand, within HP15_4112 at 4347.879 kb on + strand, within HP15_4112 at 4347.897 kb on - strand, within HP15_4112 at 4347.974 kb on + strand, within HP15_4112 at 4348.035 kb on + strand, within HP15_4112 at 4348.035 kb on + strand, within HP15_4112 at 4348.043 kb on - strand, within HP15_4112 at 4348.043 kb on - strand, within HP15_4112 at 4348.082 kb on + strand, within HP15_4112 at 4348.090 kb on - strand, within HP15_4112 at 4348.174 kb on + strand, within HP15_4112 at 4348.312 kb on - strand at 4348.380 kb on - strand at 4348.458 kb on + strand at 4348.460 kb on + strand at 4348.468 kb on - strand at 4348.585 kb on - strand at 4348.987 kb on + strand, within HP15_4113 at 4349.047 kb on - strand, within HP15_4113 at 4349.047 kb on - strand, within HP15_4113 at 4349.125 kb on - strand, within HP15_4113 at 4349.135 kb on + strand, within HP15_4113 at 4349.278 kb on + strand at 4349.278 kb on + strand at 4349.303 kb on - strand at 4349.316 kb on + strand at 4349.409 kb on - strand, within HP15_4114 at 4349.429 kb on + strand, within HP15_4114 at 4349.445 kb on + strand, within HP15_4114 at 4349.453 kb on - strand, within HP15_4114 at 4349.590 kb on - strand at 4349.607 kb on - strand at 4349.648 kb on - strand at 4349.733 kb on + strand at 4349.782 kb on + strand at 4349.998 kb on - strand, within HP15_4115 at 4350.107 kb on - strand, within HP15_4115 at 4350.283 kb on + strand, within HP15_4115 at 4350.291 kb on - strand, within HP15_4115 at 4350.291 kb on - strand, within HP15_4115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,347,723 - HP15_4112 0.63 +1.2 4,347,771 + HP15_4112 0.66 +1.1 4,347,779 - HP15_4112 0.66 +2.0 4,347,783 + HP15_4112 0.67 +0.9 4,347,807 - HP15_4112 0.68 +0.1 4,347,862 - HP15_4112 0.71 +1.4 4,347,879 + HP15_4112 0.71 -0.8 4,347,897 - HP15_4112 0.72 -0.2 4,347,974 + HP15_4112 0.76 +0.4 4,348,035 + HP15_4112 0.80 -0.2 4,348,035 + HP15_4112 0.80 +1.1 4,348,043 - HP15_4112 0.80 -2.7 4,348,043 - HP15_4112 0.80 -0.4 4,348,082 + HP15_4112 0.82 -0.8 4,348,090 - HP15_4112 0.82 +0.7 4,348,174 + HP15_4112 0.87 -0.4 4,348,312 - +0.8 4,348,380 - -1.5 4,348,458 + -1.3 4,348,460 + +0.4 4,348,468 - +1.0 4,348,585 - +1.8 4,348,987 + HP15_4113 0.45 -0.0 4,349,047 - HP15_4113 0.55 +0.1 4,349,047 - HP15_4113 0.55 +0.3 4,349,125 - HP15_4113 0.68 -1.9 4,349,135 + HP15_4113 0.70 -2.0 4,349,278 + -0.1 4,349,278 + -1.7 4,349,303 - -0.0 4,349,316 + +1.5 4,349,409 - HP15_4114 0.38 -0.3 4,349,429 + HP15_4114 0.46 -1.2 4,349,445 + HP15_4114 0.53 -0.1 4,349,453 - HP15_4114 0.56 -1.4 4,349,590 - +1.4 4,349,607 - +0.2 4,349,648 - +0.0 4,349,733 + -0.2 4,349,782 + +0.8 4,349,998 - HP15_4115 0.14 +0.6 4,350,107 - HP15_4115 0.18 +0.0 4,350,283 + HP15_4115 0.26 -0.7 4,350,291 - HP15_4115 0.26 -2.0 4,350,291 - HP15_4115 0.26 -0.4
Or see this region's nucleotide sequence