Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3721 and HP15_3722 are separated by 76 nucleotides HP15_3722 and HP15_3723 are separated by 519 nucleotides
HP15_3721: HP15_3721 - Rad3-related DNA helicase, at 3,935,668 to 3,937,965
_3721
HP15_3722: HP15_3722 - hypothetical protein, at 3,938,042 to 3,938,428
_3722
HP15_3723: HP15_3723 - PTS system, glucose-specific EIIA/HPr/phosphoenolpyruvate-protein phosphotransferase components, at 3,938,948 to 3,941,884
_3723
Position (kb)
3938
3939 Strain fitness (log2 ratio)
-2
-1
0
1 at 3937.118 kb on + strand, within HP15_3721 at 3937.155 kb on - strand, within HP15_3721 at 3937.246 kb on + strand, within HP15_3721 at 3937.309 kb on + strand, within HP15_3721 at 3937.350 kb on + strand, within HP15_3721 at 3937.398 kb on - strand, within HP15_3721 at 3937.563 kb on - strand, within HP15_3721 at 3937.594 kb on + strand, within HP15_3721 at 3937.611 kb on - strand, within HP15_3721 at 3937.618 kb on + strand, within HP15_3721 at 3937.622 kb on + strand, within HP15_3721 at 3937.625 kb on - strand, within HP15_3721 at 3937.695 kb on - strand, within HP15_3721 at 3937.724 kb on + strand, within HP15_3721 at 3937.765 kb on + strand at 3937.829 kb on + strand at 3937.928 kb on + strand at 3937.928 kb on - strand at 3938.020 kb on + strand at 3938.069 kb on - strand at 3938.174 kb on - strand, within HP15_3722 at 3938.174 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.253 kb on - strand, within HP15_3722 at 3938.274 kb on + strand, within HP15_3722 at 3938.282 kb on - strand, within HP15_3722 at 3938.295 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.398 kb on + strand at 3938.398 kb on + strand at 3938.424 kb on + strand at 3938.456 kb on - strand at 3938.657 kb on - strand at 3938.742 kb on + strand at 3938.750 kb on - strand at 3938.750 kb on - strand at 3938.822 kb on + strand at 3938.957 kb on + strand at 3939.043 kb on + strand at 3939.126 kb on - strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.235 kb on + strand at 3939.343 kb on - strand, within HP15_3723 at 3939.348 kb on + strand, within HP15_3723 at 3939.348 kb on + strand, within HP15_3723 at 3939.356 kb on - strand, within HP15_3723 at 3939.408 kb on + strand, within HP15_3723 at 3939.411 kb on - strand, within HP15_3723 at 3939.416 kb on - strand, within HP15_3723 at 3939.416 kb on - strand, within HP15_3723 at 3939.419 kb on + strand, within HP15_3723
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,937,118 + HP15_3721 0.63 -0.8 3,937,155 - HP15_3721 0.65 +0.6 3,937,246 + HP15_3721 0.69 +1.1 3,937,309 + HP15_3721 0.71 +0.3 3,937,350 + HP15_3721 0.73 +0.2 3,937,398 - HP15_3721 0.75 -1.5 3,937,563 - HP15_3721 0.82 -0.7 3,937,594 + HP15_3721 0.84 +0.1 3,937,611 - HP15_3721 0.85 +0.1 3,937,618 + HP15_3721 0.85 +0.8 3,937,622 + HP15_3721 0.85 -2.0 3,937,625 - HP15_3721 0.85 +0.5 3,937,695 - HP15_3721 0.88 -0.1 3,937,724 + HP15_3721 0.89 -0.2 3,937,765 + -1.2 3,937,829 + -1.5 3,937,928 + +0.4 3,937,928 - -0.9 3,938,020 + -0.7 3,938,069 - -1.0 3,938,174 - HP15_3722 0.34 -1.5 3,938,174 - HP15_3722 0.34 -0.6 3,938,195 - HP15_3722 0.40 -1.2 3,938,195 - HP15_3722 0.40 -1.3 3,938,253 - HP15_3722 0.55 -1.8 3,938,274 + HP15_3722 0.60 -1.1 3,938,282 - HP15_3722 0.62 -1.2 3,938,295 - HP15_3722 0.65 -0.8 3,938,322 - HP15_3722 0.72 -1.3 3,938,322 - HP15_3722 0.72 -2.4 3,938,398 + -0.4 3,938,398 + -1.3 3,938,424 + -1.9 3,938,456 - -0.5 3,938,657 - +0.9 3,938,742 + -1.1 3,938,750 - -0.7 3,938,750 - -2.1 3,938,822 + -0.5 3,938,957 + -0.2 3,939,043 + -0.0 3,939,126 - +1.6 3,939,209 + +0.7 3,939,209 + -0.3 3,939,209 + -0.5 3,939,209 + +0.3 3,939,209 + +0.3 3,939,217 - +0.2 3,939,217 - -0.1 3,939,217 - +0.1 3,939,217 - -2.7 3,939,217 - +0.5 3,939,217 - +0.4 3,939,235 + +0.1 3,939,343 - HP15_3723 0.13 -0.3 3,939,348 + HP15_3723 0.14 -0.0 3,939,348 + HP15_3723 0.14 +0.1 3,939,356 - HP15_3723 0.14 +0.4 3,939,408 + HP15_3723 0.16 +0.1 3,939,411 - HP15_3723 0.16 -0.6 3,939,416 - HP15_3723 0.16 -0.3 3,939,416 - HP15_3723 0.16 +0.7 3,939,419 + HP15_3723 0.16 -1.5
Or see this region's nucleotide sequence