Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3619 and HP15_3620 are separated by 259 nucleotides HP15_3620 and HP15_3621 overlap by 20 nucleotides HP15_3621 and HP15_3622 are separated by 77 nucleotides
HP15_3619: HP15_3619 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase, at 3,815,372 to 3,816,958
_3619
HP15_3620: HP15_3620 - conserved hypothetical protein, at 3,817,218 to 3,817,973
_3620
HP15_3621: HP15_3621 - antioxidant, AhpC/Tsa family protein, at 3,817,954 to 3,818,430
_3621
HP15_3622: HP15_3622 - peroxiredoxin, at 3,818,508 to 3,819,071
_3622
Position (kb)
3817
3818 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3816.257 kb on - strand, within HP15_3619 at 3816.267 kb on + strand, within HP15_3619 at 3816.267 kb on + strand, within HP15_3619 at 3816.275 kb on - strand, within HP15_3619 at 3816.292 kb on - strand, within HP15_3619 at 3816.316 kb on + strand, within HP15_3619 at 3816.316 kb on + strand, within HP15_3619 at 3816.412 kb on + strand, within HP15_3619 at 3816.415 kb on - strand, within HP15_3619 at 3816.477 kb on + strand, within HP15_3619 at 3816.553 kb on - strand, within HP15_3619 at 3816.575 kb on + strand, within HP15_3619 at 3816.688 kb on + strand, within HP15_3619 at 3816.855 kb on - strand at 3816.964 kb on + strand at 3817.161 kb on + strand at 3817.229 kb on - strand at 3817.327 kb on + strand, within HP15_3620 at 3817.439 kb on - strand, within HP15_3620 at 3817.456 kb on - strand, within HP15_3620 at 3817.482 kb on - strand, within HP15_3620 at 3817.526 kb on - strand, within HP15_3620 at 3817.666 kb on - strand, within HP15_3620 at 3817.666 kb on - strand, within HP15_3620 at 3817.686 kb on - strand, within HP15_3620 at 3817.691 kb on - strand, within HP15_3620 at 3817.699 kb on + strand, within HP15_3620 at 3817.709 kb on + strand, within HP15_3620 at 3817.717 kb on - strand, within HP15_3620 at 3817.717 kb on - strand, within HP15_3620 at 3817.717 kb on - strand, within HP15_3620 at 3817.743 kb on - strand, within HP15_3620 at 3817.746 kb on - strand, within HP15_3620 at 3817.944 kb on + strand at 3817.952 kb on - strand at 3817.969 kb on + strand at 3817.970 kb on + strand at 3818.062 kb on + strand, within HP15_3621 at 3818.097 kb on + strand, within HP15_3621 at 3818.097 kb on - strand, within HP15_3621 at 3818.328 kb on + strand, within HP15_3621 at 3818.328 kb on + strand, within HP15_3621 at 3818.375 kb on - strand, within HP15_3621 at 3818.506 kb on + strand at 3818.506 kb on + strand at 3818.506 kb on + strand at 3818.514 kb on - strand at 3818.533 kb on - strand at 3818.678 kb on + strand, within HP15_3622 at 3818.678 kb on + strand, within HP15_3622 at 3818.678 kb on + strand, within HP15_3622 at 3818.686 kb on - strand, within HP15_3622 at 3818.723 kb on + strand, within HP15_3622 at 3818.724 kb on + strand, within HP15_3622
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,816,257 - HP15_3619 0.56 +0.7 3,816,267 + HP15_3619 0.56 -0.8 3,816,267 + HP15_3619 0.56 -0.5 3,816,275 - HP15_3619 0.57 -0.4 3,816,292 - HP15_3619 0.58 -3.0 3,816,316 + HP15_3619 0.59 -0.2 3,816,316 + HP15_3619 0.59 -0.6 3,816,412 + HP15_3619 0.66 -0.5 3,816,415 - HP15_3619 0.66 -0.3 3,816,477 + HP15_3619 0.70 -1.1 3,816,553 - HP15_3619 0.74 -0.9 3,816,575 + HP15_3619 0.76 -1.1 3,816,688 + HP15_3619 0.83 -0.7 3,816,855 - +0.3 3,816,964 + -0.8 3,817,161 + -1.9 3,817,229 - -0.7 3,817,327 + HP15_3620 0.14 +1.3 3,817,439 - HP15_3620 0.29 +0.6 3,817,456 - HP15_3620 0.31 +2.1 3,817,482 - HP15_3620 0.35 +0.8 3,817,526 - HP15_3620 0.41 +0.5 3,817,666 - HP15_3620 0.59 +0.2 3,817,666 - HP15_3620 0.59 +0.9 3,817,686 - HP15_3620 0.62 +0.6 3,817,691 - HP15_3620 0.63 +0.1 3,817,699 + HP15_3620 0.64 +0.4 3,817,709 + HP15_3620 0.65 +0.9 3,817,717 - HP15_3620 0.66 +0.3 3,817,717 - HP15_3620 0.66 +0.3 3,817,717 - HP15_3620 0.66 +0.5 3,817,743 - HP15_3620 0.69 +0.5 3,817,746 - HP15_3620 0.70 +0.8 3,817,944 + -0.5 3,817,952 - -0.5 3,817,969 + -0.7 3,817,970 + +2.6 3,818,062 + HP15_3621 0.23 +0.2 3,818,097 + HP15_3621 0.30 -0.2 3,818,097 - HP15_3621 0.30 -0.4 3,818,328 + HP15_3621 0.78 -1.2 3,818,328 + HP15_3621 0.78 -0.1 3,818,375 - HP15_3621 0.88 -1.1 3,818,506 + -0.1 3,818,506 + -0.0 3,818,506 + +0.3 3,818,514 - -1.4 3,818,533 - -1.4 3,818,678 + HP15_3622 0.30 -1.4 3,818,678 + HP15_3622 0.30 -1.3 3,818,678 + HP15_3622 0.30 -2.9 3,818,686 - HP15_3622 0.32 -1.6 3,818,723 + HP15_3622 0.38 -0.4 3,818,724 + HP15_3622 0.38 -1.4
Or see this region's nucleotide sequence