Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3329 and HP15_3330 are separated by 169 nucleotides HP15_3330 and HP15_3331 are separated by 28 nucleotides HP15_3331 and HP15_3332 are separated by 258 nucleotides HP15_3332 and HP15_3333 are separated by 60 nucleotides
HP15_3329: HP15_3329 - NAD-dependent aldehyde dehydrogenase, at 3,488,828 to 3,490,273
_3329
HP15_3330: HP15_3330 - conserved hypothetical protein, at 3,490,443 to 3,491,081
_3330
HP15_3331: HP15_3331 - oxidoreductase, GMC family, at 3,491,110 to 3,492,699
_3331
HP15_3332: HP15_3332 - phosphopantetheine adenylyltransferase, at 3,492,958 to 3,493,434
_3332
HP15_3333: HP15_3333 - membrane protein YdgA-like protein, at 3,493,495 to 3,494,784
_3333
Position (kb)
3491
3492
3493 Strain fitness (log2 ratio)
-1
0
1 at 3490.158 kb on - strand at 3490.233 kb on - strand at 3490.320 kb on + strand at 3490.365 kb on - strand at 3490.438 kb on + strand at 3490.586 kb on + strand, within HP15_3330 at 3490.627 kb on + strand, within HP15_3330 at 3490.670 kb on + strand, within HP15_3330 at 3490.678 kb on - strand, within HP15_3330 at 3490.826 kb on + strand, within HP15_3330 at 3490.855 kb on - strand, within HP15_3330 at 3490.857 kb on + strand, within HP15_3330 at 3490.870 kb on - strand, within HP15_3330 at 3490.941 kb on + strand, within HP15_3330 at 3490.965 kb on - strand, within HP15_3330 at 3491.027 kb on + strand at 3491.035 kb on - strand at 3491.035 kb on - strand at 3491.035 kb on - strand at 3491.248 kb on - strand at 3491.362 kb on + strand, within HP15_3331 at 3491.370 kb on - strand, within HP15_3331 at 3491.385 kb on - strand, within HP15_3331 at 3491.440 kb on - strand, within HP15_3331 at 3491.697 kb on - strand, within HP15_3331 at 3491.704 kb on + strand, within HP15_3331 at 3491.932 kb on - strand, within HP15_3331 at 3492.142 kb on + strand, within HP15_3331 at 3492.183 kb on + strand, within HP15_3331 at 3492.214 kb on - strand, within HP15_3331 at 3492.234 kb on - strand, within HP15_3331 at 3492.239 kb on - strand, within HP15_3331 at 3492.298 kb on + strand, within HP15_3331 at 3492.303 kb on + strand, within HP15_3331 at 3492.306 kb on - strand, within HP15_3331 at 3492.311 kb on - strand, within HP15_3331 at 3492.327 kb on + strand, within HP15_3331 at 3492.346 kb on + strand, within HP15_3331 at 3492.354 kb on - strand, within HP15_3331 at 3492.531 kb on - strand, within HP15_3331 at 3492.562 kb on + strand at 3492.578 kb on - strand at 3492.615 kb on + strand at 3492.626 kb on + strand at 3492.653 kb on - strand at 3492.681 kb on + strand at 3492.693 kb on + strand at 3492.701 kb on - strand at 3493.493 kb on + strand at 3493.542 kb on - strand at 3493.591 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,490,158 - +0.3 3,490,233 - -1.6 3,490,320 + -0.2 3,490,365 - -1.4 3,490,438 + +0.3 3,490,586 + HP15_3330 0.22 +1.3 3,490,627 + HP15_3330 0.29 -0.1 3,490,670 + HP15_3330 0.36 +0.3 3,490,678 - HP15_3330 0.37 +0.3 3,490,826 + HP15_3330 0.60 +0.3 3,490,855 - HP15_3330 0.64 +0.4 3,490,857 + HP15_3330 0.65 -0.5 3,490,870 - HP15_3330 0.67 +0.2 3,490,941 + HP15_3330 0.78 +0.3 3,490,965 - HP15_3330 0.82 +0.3 3,491,027 + +0.3 3,491,035 - +0.2 3,491,035 - -0.1 3,491,035 - -0.6 3,491,248 - -1.6 3,491,362 + HP15_3331 0.16 -0.0 3,491,370 - HP15_3331 0.16 +0.2 3,491,385 - HP15_3331 0.17 +1.0 3,491,440 - HP15_3331 0.21 -1.2 3,491,697 - HP15_3331 0.37 +0.4 3,491,704 + HP15_3331 0.37 -1.7 3,491,932 - HP15_3331 0.52 +0.1 3,492,142 + HP15_3331 0.65 +0.4 3,492,183 + HP15_3331 0.67 -0.6 3,492,214 - HP15_3331 0.69 -0.7 3,492,234 - HP15_3331 0.71 -0.2 3,492,239 - HP15_3331 0.71 -1.1 3,492,298 + HP15_3331 0.75 -0.2 3,492,303 + HP15_3331 0.75 +0.2 3,492,306 - HP15_3331 0.75 -0.8 3,492,311 - HP15_3331 0.76 -1.0 3,492,327 + HP15_3331 0.77 -0.5 3,492,346 + HP15_3331 0.78 +1.0 3,492,354 - HP15_3331 0.78 -0.2 3,492,531 - HP15_3331 0.89 +0.3 3,492,562 + +0.2 3,492,578 - -1.0 3,492,615 + -0.2 3,492,626 + +1.0 3,492,653 - +0.3 3,492,681 + +0.4 3,492,693 + +0.1 3,492,701 - +1.1 3,493,493 + +0.6 3,493,542 - +0.7 3,493,591 - -0.0
Or see this region's nucleotide sequence