Strain Fitness in Marinobacter adhaerens HP15 around HP15_2932

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2931 and HP15_2932 are separated by 66 nucleotidesHP15_2932 and HP15_2933 are separated by 405 nucleotides HP15_2931: HP15_2931 - glycerate dehydrogenase, at 3,071,167 to 3,072,129 _2931 HP15_2932: HP15_2932 - thiopurine S-methyltransferase, at 3,072,196 to 3,072,849 _2932 HP15_2933: HP15_2933 - serine protein kinase, PrkA, at 3,073,255 to 3,075,177 _2933 Position (kb) 3072 3073Strain fitness (log2 ratio) -2 -1 0 1at 3071.225 kb on + strandat 3071.228 kb on - strandat 3071.230 kb on + strandat 3071.230 kb on + strandat 3071.285 kb on + strand, within HP15_2931at 3071.380 kb on + strand, within HP15_2931at 3071.401 kb on + strand, within HP15_2931at 3071.621 kb on - strand, within HP15_2931at 3071.773 kb on + strand, within HP15_2931at 3071.928 kb on + strand, within HP15_2931at 3071.936 kb on - strand, within HP15_2931at 3071.971 kb on - strand, within HP15_2931at 3072.081 kb on - strandat 3072.131 kb on + strandat 3072.131 kb on + strandat 3072.134 kb on - strandat 3072.144 kb on - strandat 3072.144 kb on - strandat 3072.194 kb on - strandat 3072.340 kb on + strand, within HP15_2932at 3072.386 kb on + strand, within HP15_2932at 3072.386 kb on + strand, within HP15_2932at 3072.386 kb on + strand, within HP15_2932at 3072.394 kb on - strand, within HP15_2932at 3072.394 kb on - strand, within HP15_2932at 3072.394 kb on - strand, within HP15_2932at 3072.498 kb on - strand, within HP15_2932at 3072.534 kb on + strand, within HP15_2932at 3072.561 kb on - strand, within HP15_2932at 3072.576 kb on - strand, within HP15_2932at 3072.659 kb on + strand, within HP15_2932at 3072.686 kb on - strand, within HP15_2932at 3072.686 kb on - strand, within HP15_2932at 3072.771 kb on + strand, within HP15_2932at 3072.779 kb on - strand, within HP15_2932at 3072.795 kb on + strandat 3072.843 kb on + strandat 3072.843 kb on + strandat 3072.899 kb on + strandat 3072.987 kb on + strandat 3072.987 kb on - strandat 3073.059 kb on + strandat 3073.059 kb on + strandat 3073.059 kb on + strandat 3073.059 kb on + strandat 3073.075 kb on - strandat 3073.132 kb on - strandat 3073.134 kb on + strandat 3073.198 kb on - strandat 3073.311 kb on - strandat 3073.485 kb on + strand, within HP15_2933at 3073.534 kb on - strand, within HP15_2933at 3073.545 kb on + strand, within HP15_2933at 3073.586 kb on - strand, within HP15_2933at 3073.763 kb on - strand, within HP15_2933at 3073.781 kb on - strand, within HP15_2933

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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3,071,225 + -0.2
3,071,228 - -0.2
3,071,230 + -0.0
3,071,230 + +0.0
3,071,285 + HP15_2931 0.12 -0.1
3,071,380 + HP15_2931 0.22 +0.2
3,071,401 + HP15_2931 0.24 +0.3
3,071,621 - HP15_2931 0.47 -0.9
3,071,773 + HP15_2931 0.63 -0.7
3,071,928 + HP15_2931 0.79 -0.5
3,071,936 - HP15_2931 0.80 +1.5
3,071,971 - HP15_2931 0.83 +0.9
3,072,081 - -0.3
3,072,131 + +0.3
3,072,131 + +1.0
3,072,134 - -1.1
3,072,144 - -1.4
3,072,144 - -1.3
3,072,194 - +0.6
3,072,340 + HP15_2932 0.22 -0.2
3,072,386 + HP15_2932 0.29 +0.7
3,072,386 + HP15_2932 0.29 -2.1
3,072,386 + HP15_2932 0.29 -0.0
3,072,394 - HP15_2932 0.30 -0.7
3,072,394 - HP15_2932 0.30 +0.6
3,072,394 - HP15_2932 0.30 +0.0
3,072,498 - HP15_2932 0.46 +0.3
3,072,534 + HP15_2932 0.52 +0.0
3,072,561 - HP15_2932 0.56 +0.8
3,072,576 - HP15_2932 0.58 +0.4
3,072,659 + HP15_2932 0.71 +0.5
3,072,686 - HP15_2932 0.75 -0.1
3,072,686 - HP15_2932 0.75 +0.3
3,072,771 + HP15_2932 0.88 +0.6
3,072,779 - HP15_2932 0.89 -0.3
3,072,795 + -1.8
3,072,843 + -0.4
3,072,843 + +0.2
3,072,899 + -0.7
3,072,987 + +0.3
3,072,987 - -1.4
3,073,059 + +0.2
3,073,059 + -0.1
3,073,059 + +0.5
3,073,059 + +0.2
3,073,075 - +0.0
3,073,132 - -1.5
3,073,134 + +0.1
3,073,198 - +0.5
3,073,311 - -0.2
3,073,485 + HP15_2933 0.12 +1.0
3,073,534 - HP15_2933 0.15 +0.5
3,073,545 + HP15_2933 0.15 +0.3
3,073,586 - HP15_2933 0.17 -1.1
3,073,763 - HP15_2933 0.26 -0.2
3,073,781 - HP15_2933 0.27 -0.9

Or see this region's nucleotide sequence