Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_291 and HP15_292 are separated by 31 nucleotides HP15_292 and HP15_293 are separated by 206 nucleotides HP15_293 and HP15_294 are separated by 210 nucleotides HP15_294 and HP15_295 are separated by 7 nucleotides
HP15_291: HP15_291 - membrane protein involved in aromatic hydrocarbon degradation, at 282,405 to 283,688
_291
HP15_292: HP15_292 - conserved hypothetical protein, at 283,720 to 284,121
_292
HP15_293: HP15_293 - DNA polymerase I, at 284,328 to 286,936
_293
HP15_294: HP15_294 - conserved hypothetical protein, secreted, at 287,147 to 287,485
_294
HP15_295: HP15_295 - fibronectin, type III domain protein, at 287,493 to 287,984
_295
Position (kb) 284
285
286
287 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 283.418 kb on + strand, within HP15_291 at 283.622 kb on + strand at 283.622 kb on + strand at 283.735 kb on + strand at 283.781 kb on + strand, within HP15_292 at 283.817 kb on + strand, within HP15_292 at 283.817 kb on + strand, within HP15_292 at 283.822 kb on + strand, within HP15_292 at 283.830 kb on - strand, within HP15_292 at 283.931 kb on - strand, within HP15_292 at 284.090 kb on - strand at 284.164 kb on + strand at 284.294 kb on + strand at 284.315 kb on + strand at 284.315 kb on + strand at 284.315 kb on + strand at 284.315 kb on + strand at 284.315 kb on + strand at 284.531 kb on - strand at 284.571 kb on - strand at 284.571 kb on - strand at 284.930 kb on - strand, within HP15_293 at 285.047 kb on + strand, within HP15_293 at 285.484 kb on - strand, within HP15_293 at 285.694 kb on + strand, within HP15_293 at 285.814 kb on - strand, within HP15_293 at 285.915 kb on - strand, within HP15_293 at 287.059 kb on + strand at 287.092 kb on + strand at 287.102 kb on + strand at 287.105 kb on - strand at 287.323 kb on - strand, within HP15_294 at 287.339 kb on + strand, within HP15_294 at 287.395 kb on + strand, within HP15_294 at 287.504 kb on - strand at 287.643 kb on - strand, within HP15_295 at 287.721 kb on + strand, within HP15_295 at 287.729 kb on + strand, within HP15_295 at 287.754 kb on - strand, within HP15_295 at 287.852 kb on + strand, within HP15_295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 283,418 + HP15_291 0.79 -0.0 283,622 + +0.1 283,622 + -1.1 283,735 + +0.3 283,781 + HP15_292 0.15 -0.3 283,817 + HP15_292 0.24 -0.6 283,817 + HP15_292 0.24 -0.7 283,822 + HP15_292 0.25 +0.4 283,830 - HP15_292 0.27 +0.3 283,931 - HP15_292 0.52 +0.7 284,090 - -0.2 284,164 + +1.5 284,294 + +0.4 284,315 + +0.2 284,315 + +0.4 284,315 + -0.0 284,315 + -0.5 284,315 + +0.1 284,531 - -2.4 284,571 - -0.2 284,571 - -1.4 284,930 - HP15_293 0.23 -0.2 285,047 + HP15_293 0.28 -0.4 285,484 - HP15_293 0.44 -2.8 285,694 + HP15_293 0.52 +0.9 285,814 - HP15_293 0.57 -0.7 285,915 - HP15_293 0.61 -0.9 287,059 + -1.7 287,092 + +0.1 287,102 + -0.6 287,105 - +0.2 287,323 - HP15_294 0.52 -0.6 287,339 + HP15_294 0.57 -0.2 287,395 + HP15_294 0.73 -0.9 287,504 - -0.0 287,643 - HP15_295 0.30 -0.7 287,721 + HP15_295 0.46 -1.3 287,729 + HP15_295 0.48 -0.9 287,754 - HP15_295 0.53 +0.4 287,852 + HP15_295 0.73 +0.1
Or see this region's nucleotide sequence